FFCP PHASE1:Hg19::chr6:31021225..31021239,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:31021225..31021239,+
|short_description=p3@HCG22
|description=CAGE_peak_3_at_HCG22_5end
|association_with_transcript=0bp_to_AB560771,AB600644_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=285834 | |EntrezGene=285834 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=27780 | |HGNC=27780 | ||
|TSSclassifier=strong | |||
|UniProt=E2RYF7,E3WH89 | |UniProt=E2RYF7,E3WH89 | ||
|association_with_transcript=0bp_to_AB560771,AB600644_5end | |||
|cluster_id=chr6:31021225..31021239,+ | |||
|description=CAGE_peak_3_at_HCG22_5end | |||
|id=chr6:31021225..31021239,+ | |||
|ontology_enrichment_celltype=CL:0000945!5.38e-16!24;CL:0000826!5.38e-16!24;CL:0000838!3.03e-10!52;CL:0000542!5.45e-10!53;CL:0000051!5.45e-10!53 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.91e-27;24!CL:0000542;9.03e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.80e-27,24;CL:0000826,4.80e-27,24;CL:0000838,9.89e-17,52;CL:0000542,2.07e-16,53;CL:0000051,2.07e-16,53;CL:0002087,2.63e-07,115;CL:0002031,5.50e-07,120 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.71e-19;1!CL:0000051;9.03e-09;53 | |||
|ontology_enrichment_disease=DOID:0060058!7.43e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;5.26e-29;10!DOID:4960;8.94e-20;1!DOID:0070004;8.94e-20;1!DOID:630;1.18e-19;1!DOID:0050177;1.18e-19;1!DOID:0050427;1.18e-19;1!DOID:2355;3.56e-19;1!DOID:74;2.85e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,7.03e-29,10;DOID:4960,8.95e-20,1;DOID:0070004,8.95e-20,1;DOID:630,1.08e-19,1;DOID:0050177,1.08e-19,1;DOID:0050427,1.08e-19,1;DOID:2355,4.69e-19,1;DOID:74,3.27e-10,2;DOID:2531,6.49e-09,51;DOID:0060083,6.49e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.55e-18!57;UBERON:0005068!4.55e-18!57;UBERON:0006241!4.55e-18!57;UBERON:0007135!4.55e-18!57;UBERON:0007023!6.85e-17!115;UBERON:0002346!4.28e-15!90;UBERON:0002616!7.61e-12!59;UBERON:0003075!1.15e-11!86;UBERON:0007284!1.15e-11!86;UBERON:0002240!2.12e-11!3;UBERON:0001017!5.71e-11!82;UBERON:0001896!1.26e-10!3;UBERON:0005290!1.26e-10!3;UBERON:0010096!1.26e-10!3;UBERON:0002780!1.57e-10!41;UBERON:0001890!1.57e-10!41;UBERON:0006240!1.57e-10!41;UBERON:0005743!2.94e-10!86;UBERON:0003080!3.20e-10!42;UBERON:0002298!3.51e-10!8;UBERON:0003076!3.53e-10!15;UBERON:0003057!3.53e-10!15;UBERON:0000955!2.09e-09!69;UBERON:0006238!2.09e-09!69;UBERON:0000073!7.03e-09!94;UBERON:0001016!7.03e-09!94;UBERON:0002791!7.04e-08!33;UBERON:0001893!1.34e-07!34;UBERON:0003056!2.40e-07!61;UBERON:0005174!5.48e-07!5;UBERON:0001137!5.48e-07!5;UBERON:0001950!9.25e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;3.63e-08;10!UBERON:0002106;2.88e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,3.63e-08,10;UBERON:0000358,3.63e-08,10;UBERON:0000307,3.63e-08,10;UBERON:0000091,3.63e-08,10;UBERON:0000087,3.63e-08,10;UBERON:0007010,3.63e-08,10;UBERON:0007806,3.63e-08,10;UBERON:0008780,3.63e-08,10;UBERON:0005728,3.63e-08,10;UBERON:0002106,2.79e-07,3;UBERON:0004854,2.79e-07,3;UBERON:0009034,2.79e-07,3;UBERON:0002095,2.79e-07,3;UBERON:0004782,2.79e-07,3;UBERON:0003281,2.79e-07,3;UBERON:0009664,2.79e-07,3;UBERON:0002296,2.79e-07,3;UBERON:0005602,2.79e-07,3;UBERON:0001179,2.79e-07,3;UBERON:0006293,2.79e-07,3 | |||
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| ||
|short_description=p3@HCG22 | |||
}} | }} |
Latest revision as of 19:40, 17 September 2015
Short description: | p3@HCG22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HCG22_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AB560771, AB600644_5end |
EntrezGene: | HCG22 |
HGNC: | 27780 |
UniProt: | E2RYF7E3WH89 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.80e-27 | 24 |
pro-B cell | 4.80e-27 | 24 |
lymphoid lineage restricted progenitor cell | 9.89e-17 | 52 |
lymphocyte | 2.07e-16 | 53 |
common lymphoid progenitor | 2.07e-16 | 53 |
nongranular leukocyte | 2.63e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 5.50e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 3.63e-08 | 10 |
blastocyst | 3.63e-08 | 10 |
blastula | 3.63e-08 | 10 |
bilaminar disc | 3.63e-08 | 10 |
inner cell mass | 3.63e-08 | 10 |
cleaving embryo | 3.63e-08 | 10 |
connecting stalk | 3.63e-08 | 10 |
inner cell mass derived epiblast | 3.63e-08 | 10 |
extraembryonic mesoderm | 3.63e-08 | 10 |
spleen | 2.79e-07 | 3 |
gastrointestinal system mesentery | 2.79e-07 | 3 |
stomach region | 2.79e-07 | 3 |
mesentery | 2.79e-07 | 3 |
gastrointestinal system serosa | 2.79e-07 | 3 |
mesentery of stomach | 2.79e-07 | 3 |
gut mesentery | 2.79e-07 | 3 |
dorsal mesentery | 2.79e-07 | 3 |
dorsal mesogastrium | 2.79e-07 | 3 |
peritoneal cavity | 2.79e-07 | 3 |
spleen primordium | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 7.03e-29 | 10 |
bone marrow cancer | 8.95e-20 | 1 |
myeloma | 8.95e-20 | 1 |
genetic disease | 1.08e-19 | 1 |
monogenic disease | 1.08e-19 | 1 |
xeroderma pigmentosum | 1.08e-19 | 1 |
anemia | 4.69e-19 | 1 |
hematopoietic system disease | 3.27e-10 | 2 |
hematologic cancer | 6.49e-09 | 51 |
immune system cancer | 6.49e-09 | 51 |