FFCP PHASE1:Hg19::chr16:11680032..11680069,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=9516 | |EntrezGene=9516 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=16841 | |HGNC=16841 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q99732 | |UniProt=Q99732 | ||
|association_with_transcript=159bp_to_ENST00000339430,NM_004862,uc002daz.2_5end | |association_with_transcript=159bp_to_ENST00000339430,NM_004862,uc002daz.2_5end | ||
|cluster_id=chr16:11680032..11680069,- | |||
|description=CAGE_peak_16_at_LITAF_5end | |description=CAGE_peak_16_at_LITAF_5end | ||
|id=chr16:11680032..11680069,- | |id=chr16:11680032..11680069,- |
Latest revision as of 06:33, 20 September 2015
Short description: | p16@LITAF |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_LITAF_5end |
Coexpression cluster: | NA |
Association with transcript: | 159bp_to_ENST00000339430, NM_004862, uc002daz.2_5end |
EntrezGene: | LITAF |
HGNC: | 16841 |
UniProt: | Q99732 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p16@LITAF |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 1.82e-11 | 2 |
blood cell | 3.03e-08 | 11 |
lymphocyte of B lineage | 4.63e-08 | 24 |
pro-B cell | 4.63e-08 | 24 |
hematopoietic cell | 9.21e-07 | 177 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.21e-18 | 10 |
blastocyst | 1.21e-18 | 10 |
blastula | 1.21e-18 | 10 |
bilaminar disc | 1.21e-18 | 10 |
inner cell mass | 1.21e-18 | 10 |
cleaving embryo | 1.21e-18 | 10 |
connecting stalk | 1.21e-18 | 10 |
inner cell mass derived epiblast | 1.21e-18 | 10 |
extraembryonic mesoderm | 1.21e-18 | 10 |
blood | 1.15e-12 | 15 |
Showing 1 to 10 of 13 entries