FFCP PHASE1:Hg19::chr17:38172763..38172779,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:38172763..38172779,+ | |||
|coexpression_cluster_id=C1432 | |coexpression_cluster_id=C1432 | ||
|description=CAGE_peak_at_chr17:38172763..38172779,+ | |description=CAGE_peak_at_chr17:38172763..38172779,+ |
Latest revision as of 16:16, 25 July 2015
Short description: | p@chr17:38172763..38172779, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38172763..38172779, + |
Coexpression cluster: | C1432_mesenchymal_Smooth_Lymphatic_Preadipocyte_Sebocyte_CD14_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p@chr17:38172763..38172779+ |
---|
0
2
4
6
8
10
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 1.78e-23 | 2 |
lymphangioblast | 3.91e-17 | 6 |
endothelial cell of lymphatic vessel | 3.91e-17 | 6 |
vascular lymphangioblast | 3.91e-17 | 6 |
vascular associated smooth muscle cell | 2.16e-16 | 32 |
smooth muscle cell of the coronary artery | 9.09e-16 | 3 |
smooth muscle cell | 4.84e-12 | 43 |
smooth muscle myoblast | 4.84e-12 | 43 |
smooth muscle cell of the subclavian artery | 5.69e-10 | 5 |
muscle cell | 2.84e-09 | 55 |
Showing 1 to 10 of 18 entries
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 1.78e-23 | 2 |
systemic artery | 7.06e-16 | 33 |
systemic arterial system | 7.06e-16 | 33 |
coronary artery | 9.09e-16 | 3 |
vessel | 5.73e-15 | 68 |
lymphatic vessel | 5.26e-13 | 8 |
lymph vasculature | 5.26e-13 | 8 |
lymphatic part of lymphoid system | 5.26e-13 | 8 |
vasculature | 7.00e-13 | 78 |
vascular system | 7.00e-13 | 78 |
Showing 1 to 10 of 44 entries