FFCP PHASE1:Hg19::chr6:54173227..54173264,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:54173227..54173264,+
|short_description=p1@TINAG
|description=CAGE_peak_1_at_TINAG_5end
|association_with_transcript=0bp_to_ENST00000259782_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27283 | |EntrezGene=27283 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14599 | |HGNC=14599 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UJW2 | |UniProt=Q9UJW2 | ||
|association_with_transcript=0bp_to_ENST00000259782_5end | |||
|cluster_id=chr6:54173227..54173264,+ | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_1_at_TINAG_5end | |||
|id=chr6:54173227..54173264,+ | |||
|ontology_enrichment_celltype=CL:1000497!1.46e-17!18;CL:0002518!1.46e-17!18;CL:1000507!1.32e-16!12;CL:1000494!1.32e-16!12;CL:0000239!2.10e-13!3;CL:1000615!2.10e-13!3;CL:0002306!2.10e-13!3;CL:1000449!3.27e-12!16;CL:0002681!5.98e-08!13;CL:0002584!5.98e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:1000507;2.51e-28;10!CL:1000494;2.51e-28;10!CL:1000497;9.90e-27;17!CL:0002518;9.90e-27;17!CL:1000449;1.26e-18;15!CL:0000239;2.56e-18;3!CL:1000615;2.56e-18;3!CL:0002306;2.56e-18;3!CL:0002681;3.71e-12;12!CL:0002584;3.71e-12;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.36e-28,10;CL:1000494,2.36e-28,10;CL:1000497,1.02e-26,17;CL:0002518,1.02e-26,17;CL:1000449,1.21e-18,15;CL:0000239,2.20e-18,3;CL:1000615,2.20e-18,3;CL:0002306,2.20e-18,3;CL:0002681,3.71e-12,12;CL:0002584,3.71e-12,12 | |||
|ontology_enrichment_development_v019=UBERON:0003918;5.14e-10;10!UBERON:0007687;5.14e-10;10!UBERON:0001045;2.21e-07;1!UBERON:0006242;4.21e-07;1 | |||
|ontology_enrichment_disease=DOID:4468!1.45e-09!2;DOID:299!1.64e-07!25 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p1@TINAG | |||
}} | }} |
Latest revision as of 08:16, 19 September 2015
Short description: | p1@TINAG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TINAG_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | 0bp_to_ENST00000259782_5end |
EntrezGene: | TINAG |
HGNC: | 14599 |
UniProt: | Q9UJW2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.36e-28 | 10 |
nephron tubule epithelial cell | 2.36e-28 | 10 |
kidney cell | 1.02e-26 | 17 |
kidney epithelial cell | 1.02e-26 | 17 |
epithelial cell of nephron | 1.21e-18 | 15 |
brush border epithelial cell | 2.20e-18 | 3 |
kidney cortex tubule cell | 2.20e-18 | 3 |
epithelial cell of proximal tubule | 2.20e-18 | 3 |
kidney cortical cell | 3.71e-12 | 12 |
renal cortical epithelial cell | 3.71e-12 | 12 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 2.36e-28 | 10 |
kidney | 6.86e-26 | 26 |
kidney mesenchyme | 6.86e-26 | 26 |
upper urinary tract | 6.86e-26 | 26 |
kidney rudiment | 6.86e-26 | 26 |
kidney field | 6.86e-26 | 26 |
cavitated compound organ | 2.16e-21 | 31 |
nephron epithelium | 1.21e-18 | 15 |
renal tubule | 1.21e-18 | 15 |
nephron tubule | 1.21e-18 | 15 |
nephron | 1.21e-18 | 15 |
uriniferous tubule | 1.21e-18 | 15 |
nephrogenic mesenchyme | 1.21e-18 | 15 |
renal cortex tubule | 2.20e-18 | 3 |
region of nephron tubule | 2.20e-18 | 3 |
proximal tubule | 2.20e-18 | 3 |
excretory tube | 1.98e-17 | 16 |
kidney epithelium | 1.98e-17 | 16 |
abdomen element | 3.18e-16 | 54 |
abdominal segment element | 3.18e-16 | 54 |
intestine | 4.66e-16 | 17 |
abdominal segment of trunk | 2.39e-14 | 60 |
abdomen | 2.39e-14 | 60 |
gastrointestinal system | 5.04e-14 | 25 |
urinary system structure | 2.00e-13 | 47 |
renal system | 4.18e-13 | 48 |
cortex of kidney | 3.71e-12 | 12 |
renal parenchyma | 3.71e-12 | 12 |
small intestine | 6.70e-12 | 4 |
colon | 3.68e-11 | 9 |
cortex | 1.09e-09 | 15 |
parenchyma | 1.09e-09 | 15 |
large intestine | 3.76e-09 | 11 |
trunk region element | 7.57e-09 | 101 |
compound organ | 1.14e-08 | 68 |
vermiform appendix | 2.21e-07 | 1 |
caecum | 2.21e-07 | 1 |
midgut | 2.21e-07 | 1 |