FFCP PHASE1:Hg19::chr20:44521809..44521827,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=5476 | |EntrezGene=5476 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=9251 | |HGNC=9251 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=209bp_to_ENST00000493522_5end | |association_with_transcript=209bp_to_ENST00000493522_5end | ||
|cluster_id=chr20:44521809..44521827,+ | |||
|coexpression_cluster_id=C103 | |coexpression_cluster_id=C103 | ||
|description=CAGE_peak_11_at_CTSA_5end | |description=CAGE_peak_11_at_CTSA_5end |
Latest revision as of 13:02, 16 September 2015
Short description: | p11@CTSA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CTSA_5end |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | 209bp_to_ENST00000493522_5end |
EntrezGene: | CTSA |
HGNC: | 9251 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p11@CTSA |
---|
0
2
4
6
8
10
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.22e-59 | 18 |
alpha-beta T cell | 1.22e-59 | 18 |
immature T cell | 1.22e-59 | 18 |
mature T cell | 1.22e-59 | 18 |
immature alpha-beta T cell | 1.22e-59 | 18 |
lymphoid lineage restricted progenitor cell | 1.65e-54 | 52 |
lymphocyte | 2.34e-53 | 53 |
common lymphoid progenitor | 2.34e-53 | 53 |
T cell | 5.62e-53 | 25 |
pro-T cell | 5.62e-53 | 25 |
Showing 1 to 10 of 25 entries