FFCP PHASE1:Hg19::chr7:134653623..134653707,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:134653623..134653707,+
|short_description=p@chr7:134653623..134653707,+
|description=CAGE_peak_at_chr7:134653623..134653707,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:134653623..134653707,+ | |||
|coexpression_cluster_id=C320 | |||
|description=CAGE_peak_at_chr7:134653623..134653707,+ | |||
|id=chr7:134653623..134653707,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.83e-17!180;CL:0000057!1.31e-09!75;CL:0000680!9.14e-08!57;CL:0000056!9.14e-08!57;CL:0000355!9.14e-08!57;CL:0000187!3.55e-07!54;CL:0000393!7.38e-07!60;CL:0000211!7.38e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000134;1.21e-07;55!CL:0002334;5.28e-07;12!CL:0000723;9.35e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.50e-10,76;CL:0000680,1.30e-07,58;CL:0000056,1.30e-07,58;CL:0000355,1.30e-07,58;CL:0000187,3.14e-07,55;CL:0002334,8.84e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.54e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.06e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000468!1.71e-10!659;UBERON:0000475!1.45e-09!365;UBERON:0000914!4.38e-09!83;UBERON:0002329!4.38e-09!83;UBERON:0003077!4.38e-09!83;UBERON:0003059!4.38e-09!83;UBERON:0007282!4.38e-09!83;UBERON:0009618!4.38e-09!83;UBERON:0007285!4.38e-09!83;UBERON:0005256!2.51e-08!143;UBERON:0000486!3.34e-08!82;UBERON:0002385!5.84e-08!63;UBERON:0001015!5.84e-08!63;UBERON:0000383!5.84e-08!63;UBERON:0000481!5.94e-08!347;UBERON:0001134!1.22e-07!61;UBERON:0002036!1.22e-07!61;UBERON:0003082!1.22e-07!61;UBERON:0004290!2.22e-07!70;UBERON:0003102!2.95e-07!95;UBERON:0000467!3.38e-07!625;UBERON:0000480!4.92e-07!626;UBERON:0002100!5.69e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.13e-08;9!UBERON:0000042;1.13e-08;9!UBERON:0003688;3.94e-07;6!UBERON:0002358;3.94e-07;6!UBERON:0003684;3.94e-07;6!UBERON:0001178;3.94e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,2.88e-08,122;UBERON:0002385,7.94e-08,64;UBERON:0001015,7.94e-08,64;UBERON:0000383,7.94e-08,64;UBERON:0000486,1.18e-07,83;UBERON:0001134,1.49e-07,62;UBERON:0002036,1.49e-07,62;UBERON:0003082,1.49e-07,62;UBERON:0007524,1.65e-07,73;UBERON:0002329,2.73e-07,71;UBERON:0003059,2.73e-07,71;UBERON:0007282,2.73e-07,71;UBERON:0004290,2.73e-07,71;UBERON:0009618,2.73e-07,71;UBERON:0003688,4.01e-07,6;UBERON:0002358,4.01e-07,6;UBERON:0003684,4.01e-07,6;UBERON:0001178,4.01e-07,6;UBERON:0003104,4.77e-07,160;UBERON:0009142,4.77e-07,160;UBERON:0003077,4.77e-07,72;UBERON:0007285,4.77e-07,72 | |||
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| ||
|short_description=p@chr7:134653623..134653707,+ | |||
}} | }} |
Latest revision as of 06:21, 31 July 2015
Short description: | p@chr7:134653623..134653707, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:134653623..134653707, + |
Coexpression cluster: | C320_Olfactory_Ewing_smooth_hepatic_Hair_Mesenchymal_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.50e-10 | 76 |
muscle precursor cell | 1.30e-07 | 58 |
myoblast | 1.30e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.30e-07 | 58 |
muscle cell | 3.14e-07 | 55 |
preadipocyte | 8.84e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 2.88e-08 | 122 |
muscle tissue | 7.94e-08 | 64 |
musculature | 7.94e-08 | 64 |
musculature of body | 7.94e-08 | 64 |
multilaminar epithelium | 1.18e-07 | 83 |
skeletal muscle tissue | 1.49e-07 | 62 |
striated muscle tissue | 1.49e-07 | 62 |
myotome | 1.49e-07 | 62 |
dense mesenchyme tissue | 1.65e-07 | 73 |
somite | 2.73e-07 | 71 |
presomitic mesoderm | 2.73e-07 | 71 |
presumptive segmental plate | 2.73e-07 | 71 |
dermomyotome | 2.73e-07 | 71 |
trunk paraxial mesoderm | 2.73e-07 | 71 |
omentum | 4.01e-07 | 6 |
peritoneum | 4.01e-07 | 6 |
abdominal cavity | 4.01e-07 | 6 |
visceral peritoneum | 4.01e-07 | 6 |
mesenchyme | 4.77e-07 | 160 |
entire embryonic mesenchyme | 4.77e-07 | 160 |
paraxial mesoderm | 4.77e-07 | 72 |
presumptive paraxial mesoderm | 4.77e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.06e-07 | 14 |