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FFCP PHASE1:Hg19::chr3:54962005..54962014,-: Difference between revisions

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{{FFCP
{{FFCP
|DPIdataset=robustDPI
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=57408
|EntrezGene=57408
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=25023
|HGNC=25023
|TSSclassifier=S
|TSSclassifier=strong
|UniProt=Q9HBL6
|UniProt=Q9HBL6
|association_with_transcript=57bp_to_NM_020678,uc003dhl.2_5end
|association_with_transcript=57bp_to_NM_020678,uc003dhl.2_5end
|cluster_id=chr3:54962005..54962014,-
|coexpression_cluster_id=C24
|coexpression_cluster_id=C24
|description=CAGE_peak_4_at_LRTM1_5end
|description=CAGE_peak_4_at_LRTM1_5end

Latest revision as of 02:25, 19 September 2015

Short description:p4@LRTM1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_4_at_LRTM1_5end
Coexpression cluster:C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral
Association with transcript: 57bp_to_NM_020678, uc003dhl.2_5end
EntrezGene:LRTM1
HGNC: 25023
UniProt: Q9HBL6
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data