FFCP PHASE1:Hg19::chr3:54962005..54962014,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=57408 | |EntrezGene=57408 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=25023 | |HGNC=25023 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q9HBL6 | |UniProt=Q9HBL6 | ||
|association_with_transcript=57bp_to_NM_020678,uc003dhl.2_5end | |association_with_transcript=57bp_to_NM_020678,uc003dhl.2_5end | ||
|cluster_id=chr3:54962005..54962014,- | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_4_at_LRTM1_5end | |description=CAGE_peak_4_at_LRTM1_5end |
Latest revision as of 02:25, 19 September 2015
Short description: | p4@LRTM1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LRTM1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 57bp_to_NM_020678, uc003dhl.2_5end |
EntrezGene: | LRTM1 |
HGNC: | 25023 |
UniProt: | Q9HBL6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@LRTM1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 5.68e-99 | 2 |
regional part of epithalamus | 5.68e-99 | 2 |
secretory circumventricular organ | 5.68e-99 | 2 |
circumventricular organ | 5.68e-99 | 2 |
epithalamus | 5.68e-99 | 2 |
gland of diencephalon | 3.11e-50 | 4 |
neuroendocrine gland | 3.11e-50 | 4 |
regional part of diencephalon | 3.11e-50 | 4 |
diencephalon | 2.74e-29 | 7 |
future diencephalon | 2.74e-29 | 7 |
Showing 1 to 10 of 12 entries