FFCP PHASE1:Hg19::chr7:19157392..19157398,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:19157392..19157398,+
|short_description=p@chr7:19157392..19157398,+
|description=CAGE_peak_at_chr7:19157392..19157398,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:19157392..19157398,+ | |||
|description=CAGE_peak_at_chr7:19157392..19157398,+ | |||
|id=chr7:19157392..19157398,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.59e-28!180;CL:0000057!1.33e-19!75;CL:0002620!4.92e-15!23;CL:0000680!7.29e-08!57;CL:0000056!7.29e-08!57;CL:0000355!7.29e-08!57;CL:0000048!8.88e-08!430;CL:0000723!1.74e-07!436;CL:0000034!2.57e-07!444;CL:0002371!2.58e-07!591;CL:0000136!3.68e-07!15;CL:0000183!8.93e-07!59;CL:0000499!9.99e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002620;6.39e-27;23!CL:0002559;8.40e-14;5!CL:0000346;6.08e-09;3!CL:1000428;6.08e-09;3!CL:0002603;8.79e-09;3!CL:0002363;9.02e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,8.46e-27,23;CL:0002559,8.88e-14,5;CL:0000057,8.94e-12,76;CL:0002603,6.05e-09,3;CL:0000346,6.40e-09,3;CL:1000428,6.40e-09,3;CL:0002363,6.82e-07,2;CL:0000008,6.82e-07,2;CL:0002602,8.10e-07,2;CL:0002575,9.08e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000008;9.02e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;8.00e-09;5!DOID:450;8.00e-09;5!DOID:66;8.00e-09;5!DOID:423;8.00e-09;5!DOID:0080000;8.00e-09;5!DOID:11722;8.00e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.67e-09,5;DOID:450,6.67e-09,5;DOID:66,6.67e-09,5;DOID:423,6.67e-09,5;DOID:0080000,6.67e-09,5;DOID:11722,6.67e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.93e-16!95;UBERON:0002199!1.20e-14!45;UBERON:0002416!1.20e-14!45;UBERON:0000914!9.21e-14!83;UBERON:0002329!9.21e-14!83;UBERON:0003077!9.21e-14!83;UBERON:0003059!9.21e-14!83;UBERON:0007282!9.21e-14!83;UBERON:0009618!9.21e-14!83;UBERON:0007285!9.21e-14!83;UBERON:0002097!4.86e-13!40;UBERON:0004290!7.11e-11!70;UBERON:0000486!2.80e-10!82;UBERON:0002385!1.39e-07!63;UBERON:0001015!1.39e-07!63;UBERON:0000383!1.39e-07!63;UBERON:0001134!1.59e-07!61;UBERON:0002036!1.59e-07!61;UBERON:0003082!1.59e-07!61;UBERON:0000475!1.77e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.75e-19;41!UBERON:0003102;1.23e-17;50!UBERON:0002199;2.55e-16;46!UBERON:0002416;2.55e-16;46!UBERON:0002073;8.40e-14;5!UBERON:0002067;1.07e-10;9!UBERON:0000412;6.08e-09;3!UBERON:0001992;6.08e-09;3!UBERON:0004905;1.65e-08;8!UBERON:0000982;1.65e-08;8!UBERON:0004770;1.65e-08;8!UBERON:0003566;9.02e-07;2!UBERON:0001777;9.02e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,7.63e-27,41;UBERON:0002199,8.70e-26,46;UBERON:0002416,8.70e-26,46;UBERON:0003102,9.31e-16,99;UBERON:0002073,8.88e-14,5;UBERON:0005086,8.88e-14,5;UBERON:0002067,9.01e-11,9;UBERON:0004016,9.01e-11,9;UBERON:0010083,9.01e-11,9;UBERON:0000412,6.40e-09,3;UBERON:0001992,6.40e-09,3;UBERON:0004905,1.95e-08,8;UBERON:0000982,1.95e-08,8;UBERON:0004770,1.95e-08,8;UBERON:0007524,1.47e-07,73;UBERON:0003566,6.82e-07,2;UBERON:0001777,6.82e-07,2;UBERON:0000486,7.17e-07,83;UBERON:0002329,7.91e-07,71;UBERON:0003059,7.91e-07,71;UBERON:0007282,7.91e-07,71;UBERON:0004290,7.91e-07,71;UBERON:0009618,7.91e-07,71;UBERON:0006444,8.10e-07,2;UBERON:0001995,8.10e-07,2;UBERON:0004715,8.10e-07,2 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.281908808191942,0,1.34088328328186,0,0,0.631719873426831,2.35067065379855,0,0,0,0,1.73272894144065,2.65117900582333,0.672325146451775,0,0,0,1.84681587115182,2.04000691244253,1.56727360739044,0,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,0.50133791063589,1.59331170856906,0,0.973269740605272,0.283604451492204,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0.49333509683432,0.311211035399766,0.269421344139376,0.163461903113459,0.454072282934794,0,2.34321431833797,0,0,0.747243402759005,2.23125547423153,2.10434827678571,1.82586048712923,0.61246251376468,0.737005903870608,2.06651562351531,0,0.494533858557114,0,0.718618141816238,1.34668891163253,1.37630371859161,0.554128230968366,0.438977620880838,0,0.751190294532984,0.226864366320042,0.179389635688862,1.92201649936711,1.05965950579781,2.10063767259082,1.64884046781502,3.86460810068444,1.30281799432113,1.0126579934476,1.46155507741798,2.01947019395292,1.65689817556139,4.20279747728911,2.4850671476163,1.10827308050404,0.169560592310488,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,1.56449532329816,3.21620469096443,1.38134921352481,2.3218396401599,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,1.62904152655162,7.27954349695705,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0,0,0,0.560655421726804,0.43596006883328,0.22001485746285,0,3.57656445851882,0,0,0,0.771622122786426,1.41849132023278,2.39779961114489,0.142977993658148,1.62786481617433,2.46972101034231,0,0,0.791951872933429,0,0,0,0,0,0,0.239624855491583,0,1.42636905040718,0.434343920002738,0.821905290201534,1.43248770591916,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,4.50153468953709,0.813795071099207,1.66376689224646,1.07057393278297,1.57702415033935,0.702848489956279,0.601892199455438,4.5481500811197,0,0,0.921845842708516,0.868836144680828,1.76221041716467,2.40200396667599,0,0,0,0,0,0,0,0.306923946576125,0.280660094433074,0.256278298511402,0,0,0,0.154209693802656,0.177561725313127,0.246381468041427,0,0.232420756919918,0,0,0,0.229628896329213,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,1.54048617114644,0.921022048356777,0.551346289938122,2.68550612170684,2.0302337147992,0.170453254832202,0.267096106940212,0,0,0,0,0,0.31481234683064,0,0,0,0,0.37064843820784,0,1.48863347743867,0.316379424718726,0,0,0.42793898803392,0.318203247925937,0,0.179872457583315,0.54907405947211,0.471249609382746,0.404364963146632,1.58510321173008,0.421258456238981,1.95053495635836,0.243713489631284,1.05650146756755,0.136499911407986,0.141405431953713,0,0,0,0,0,1.31178950409327,0,0,0,0.717056761020258,0.589494246078727,0,0,1.05553817648832,0.987884678879706,1.13841952129715,2.0996083214699,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0.278406173895242,0,0.270455678475983,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.398495976502139,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.379119477770928,0.150323419414493,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0,2.0638323896594,0,0,0,0.0969890164884194,0,1.12990370390266,0,0.397429223405979,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0.407712618220842,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0.199679000498991,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0,0,0,1.02232813071253,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0.544017803369474,0.5013797880454,2.14441903734423,2.95085367638824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.701139929541673,0,1.32582103692562,0.50313580350515,0,0.228840068396924,0.302461847526478,0.310874401165561,0.147855149989634,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0.363697318405119,0,0,0,0.800055529326307,0.686791410365586,0.336749488765919,0,0.385239660814607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,1.66262682694747,0,0,1.85656384926424,0.169732529954025,3.40119872162693,0,0,0,0,0,2.46873160583479,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0.115525666150338,0,0,0.397832444232549,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,5.80375106386748,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0.3414369541879,0.691259661814092,0,0.118332000730565,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| ||
|short_description=p@chr7:19157392..19157398,+ | |||
}} | }} |
Latest revision as of 08:17, 31 July 2015
Short description: | p@chr7:19157392..19157398, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:19157392..19157398, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 8.46e-27 | 23 |
hair follicle cell | 8.88e-14 | 5 |
fibroblast | 8.94e-12 | 76 |
astrocyte of the cerebellum | 6.05e-09 | 3 |
hair follicle dermal papilla cell | 6.40e-09 | 3 |
stem cell of epidermis | 6.40e-09 | 3 |
keratocyte | 6.82e-07 | 2 |
migratory cranial neural crest cell | 6.82e-07 | 2 |
annulus pulposus cell | 8.10e-07 | 2 |
central nervous system pericyte | 9.08e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
skin of body | 7.63e-27 | 41 |
integument | 8.70e-26 | 46 |
integumental system | 8.70e-26 | 46 |
surface structure | 9.31e-16 | 99 |
hair follicle | 8.88e-14 | 5 |
hair follicle placode | 8.88e-14 | 5 |
dermis | 9.01e-11 | 9 |
dermatome | 9.01e-11 | 9 |
future dermis | 9.01e-11 | 9 |
dermal papilla | 6.40e-09 | 3 |
papillary layer of dermis | 6.40e-09 | 3 |
articulation | 1.95e-08 | 8 |
skeletal joint | 1.95e-08 | 8 |
articular system | 1.95e-08 | 8 |
dense mesenchyme tissue | 1.47e-07 | 73 |
head connective tissue | 6.82e-07 | 2 |
substantia propria of cornea | 6.82e-07 | 2 |
multilaminar epithelium | 7.17e-07 | 83 |
somite | 7.91e-07 | 71 |
presomitic mesoderm | 7.91e-07 | 71 |
presumptive segmental plate | 7.91e-07 | 71 |
dermomyotome | 7.91e-07 | 71 |
trunk paraxial mesoderm | 7.91e-07 | 71 |
annulus fibrosus | 8.10e-07 | 2 |
fibrocartilage | 8.10e-07 | 2 |
annulus fibrosus disci intervertebralis | 8.10e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.67e-09 | 5 |
myotonic disease | 6.67e-09 | 5 |
muscle tissue disease | 6.67e-09 | 5 |
myopathy | 6.67e-09 | 5 |
muscular disease | 6.67e-09 | 5 |
myotonic dystrophy | 6.67e-09 | 5 |