FFCP PHASE1:Hg19::chr7:192311..192322,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:192311..192322,+
|short_description=p@chr7:192311..192322,+
|description=CAGE_peak_at_chr7:192311..192322,+
|association_with_transcript=NA
|EntrezGene=NA...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:192311..192322,+ | |||
|coexpression_cluster_id=C4671 | |||
|description=CAGE_peak_at_chr7:192311..192322,+ | |||
|id=chr7:192311..192322,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.08e-20!180;CL:0000057!1.23e-10!75;CL:0000188!1.30e-09!9;CL:0002319!3.18e-07!25;CL:0000393!7.16e-07!60;CL:0000211!7.16e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000188;8.58e-20;9!CL:0000128;3.89e-18;7!CL:0000126;3.89e-18;7!CL:0000127;3.89e-18;7!CL:0002603;1.01e-16;3!CL:0000708;6.31e-16;3!CL:0002575;1.55e-11;2!CL:0002549;5.51e-11;2!CL:0000243;2.89e-10;15!CL:0000125;2.89e-10;15!CL:0000095;4.06e-09;17!CL:0002319;2.85e-08;25!CL:0002605;2.67e-07;3!CL:0002564;2.67e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,7.82e-20,9;CL:0000128,2.46e-18,7;CL:0000126,2.46e-18,7;CL:0000127,2.46e-18,7;CL:0002453,2.46e-18,7;CL:0002603,9.60e-17,3;CL:0000708,3.64e-16,3;CL:0002575,1.72e-11,2;CL:0002549,7.83e-11,2;CL:0000243,2.45e-10,15;CL:0000125,2.45e-10,15;CL:0000030,2.45e-10,15;CL:0000339,2.45e-10,15;CL:0000095,3.51e-09,17;CL:0000123,3.51e-09,17;CL:0002319,2.48e-08,25;CL:0002605,1.81e-07,3;CL:0002564,4.45e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000339;2.89e-10;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!6.71e-13!347;UBERON:0000475!7.16e-13!365;UBERON:0000119!1.71e-11!312;UBERON:0000033!5.21e-11!123;UBERON:0000153!5.44e-11!129;UBERON:0007811!5.44e-11!129;UBERON:0000483!2.76e-10!309;UBERON:0000922!7.43e-10!612;UBERON:0000073!8.13e-10!94;UBERON:0001016!8.13e-10!94;UBERON:0004121!8.82e-10!169;UBERON:0000468!2.54e-09!659;UBERON:0002200!3.31e-09!11;UBERON:0006876!3.31e-09!11;UBERON:0000924!4.50e-09!173;UBERON:0006601!4.50e-09!173;UBERON:0005743!4.86e-09!86;UBERON:0001017!9.07e-09!82;UBERON:0000914!2.65e-08!83;UBERON:0002329!2.65e-08!83;UBERON:0003077!2.65e-08!83;UBERON:0003059!2.65e-08!83;UBERON:0007282!2.65e-08!83;UBERON:0009618!2.65e-08!83;UBERON:0007285!2.65e-08!83;UBERON:0002050!3.53e-08!605;UBERON:0005423!3.53e-08!605;UBERON:0000923!6.82e-08!604;UBERON:0005291!6.82e-08!604;UBERON:0006598!6.82e-08!604;UBERON:0002532!6.82e-08!604;UBERON:0000955!1.21e-07!69;UBERON:0006238!1.21e-07!69;UBERON:0003075!2.75e-07!86;UBERON:0007284!2.75e-07!86;UBERON:0002616!3.15e-07!59;UBERON:0004290!3.23e-07!70;UBERON:0000467!3.54e-07!625;UBERON:0000480!4.40e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0003210;6.31e-16;3!UBERON:0005629;5.51e-11;2!UBERON:0005358;5.51e-11;2!UBERON:0001886;5.51e-11;2!UBERON:0004086;5.51e-11;2!UBERON:0005282;5.51e-11;2!UBERON:0005281;5.51e-11;2!UBERON:0001134;7.20e-11;16!UBERON:0002036;7.20e-11;16!UBERON:0002037;1.40e-08;6!UBERON:0002242;2.67e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003210,3.64e-16,3;UBERON:0005629,7.83e-11,2;UBERON:0005358,7.83e-11,2;UBERON:0001886,7.83e-11,2;UBERON:0004086,7.83e-11,2;UBERON:0005282,7.83e-11,2;UBERON:0005281,7.83e-11,2;UBERON:0002037,1.37e-08,6;UBERON:0006215,1.37e-08,6;UBERON:0002242,4.45e-07,3;UBERON:0003068,4.45e-07,3;UBERON:0002328,4.45e-07,3;UBERON:0004880,4.45e-07,3 | |||
|phase1_expression=0,0.214100523890983,0.422863212287913,0,0,0,2.53299878168311,0,0.522371256399677,0.245733936501509,0,0,0,0.495065411840187,0,0,0,0,0.487932798790507,7.26414242653049,4.89601658986207,9.40364164434263,1.71741592278634,1.23186982565596,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,0.255725123687061,0.361439152384566,0,0.144846518960824,0,0,0.472674085820339,0.443458794925128,0.43917392846563,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.633152558322899,0,0.286836620748814,0.709336764396714,0.560677600142307,1.06748995729705,0.98667019366864,0.622422070799533,0,0.163461903113459,1.05950199351452,3.45705554687999,0.234321431833797,0.312160076830321,1.1409436430889,1.19558944441441,0.117434498643765,0.161872944368132,0.280901613404497,0.61246251376468,1.10550885580591,0.103325781175765,1.18800285728205,0.247266929278557,0,0,0.673344455816265,0.250237039743928,0.277064115484183,0,0.30648779579902,1.05166641234618,0.113432183160021,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0,0,0.506328996723799,0,0.252433774244115,0.184099797284599,0.484938170456436,0,0,0.169560592310488,0,0,0,0.487894824518382,0.795178609928912,0.348581828608555,0.310983165046111,0.252320850875628,0,0,5.14592750554308,0,0.928735856063958,1.44375896333917,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0.686271241194102,0,0,0,0.0925884451585296,0,1.03993478527958,1.44331342025273,0.579652024875384,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,4.26098120512371,3.48768055066624,1.54010400223995,0.258543431515556,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,2.85273810081437,0,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,1.27587750330633,0,0,0,1.10422342547226,1.00034104211935,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,4.11182430671755,3.43143423810856,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0,0,0,0.355123450626254,0,0,0.464841513839837,0,0,0,0,0.182091168006717,0.524497659837696,0,0.0770153371044148,0.784349769176855,1.46139224653261,0.211103257785751,0,0,0,0,0,0.501689773854853,0,0,0.895499018888713,0,0,0,0.656029291399411,0.325378394664303,0,0,0,0,0,0,3.86682873168488,2.31072925671967,2.14905144616581,0.689182862422653,0.751941714077915,0.580066775656914,1.27839941124151,3.29418531892928,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.949138274156178,0.38126038784765,0.511795582622668,0,0.318203247925937,0,0,0,0,0,0,0,0.48763373908959,0,0,0.136499911407986,0.141405431953713,0,0,0.66343897524122,0.438450885253763,1.15755106853338,0.655894752046633,0,0,0,0,0.0982490410131212,0.35667105148125,0.354761064070598,0.211107635297664,0,0.75894634753143,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0.779160935160341,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0.134802265961354,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0.103688191397247,0,0.661983911750998,0.627865836814451,0,0,0,0,0,0.174118413160805,0,0,0,0,0.0821154570532092,0,0.0882561266915003,0,0.685209623233754,0.794858446811959,0.126621591911757,0,0.240476460754601,0.213452994739353,0.19980960958213,0,0,0,0,0.124252535565433,0,0.407712618220842,0.627617077873999,2.14196257036276,0.577901179803038,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0,0,0,0.403100834920358,0,0,0,0,0,0.0984274815147488,0,0,0,0.321506296930038,0.412618309791701,0.83088067605837,0.2249738915515,0,0.182248669974074,0,0,0.209818352539992,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0.681552087141687,1.01980882368113,0,0,0.129282956361551,0.39669780522807,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.110929051536852,0.310482014706917,0,0,0,0,0,0,0.28984205722165,0.149254802886874,0,0.554805861502613,0,0.50313580350515,0,0,0.302461847526478,0.15543720058278,0.147855149989634,0,0.449803112163605,0.155262956876259,0,0,0,0,0.761610424337591,0,0.363697318405119,0.107410557042488,0,0,0.400027764663154,1.37358282073117,1.34699795506368,0,0,0,0,0,0.463044948647668,0.244736704506468,0.537266523244462,0,0,0.353378291891762,0.38582807654183,0,0.256241518587947,0.345430341731199,0.303859956177382,0.138258436151731,0,0,0,0.982829546539238,0,0,0,0,0,0,0,0,0,0.127894371303652,0.215649622793364,0.157265941855896,0.109209638192014,0,0,0,0,0.318004350653419,0.078861745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| ||
|short_description=p@chr7:192311..192322,+ | |||
}} | }} |
Latest revision as of 08:18, 31 July 2015
Short description: | p@chr7:192311..192322, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:192311..192322, + |
Coexpression cluster: | C4671_Astrocyte_Meningeal_Hair_Pericytes_Skeletal_glioblastoma_normal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 7.82e-20 | 9 |
oligodendrocyte | 2.46e-18 | 7 |
macroglial cell | 2.46e-18 | 7 |
astrocyte | 2.46e-18 | 7 |
oligodendrocyte precursor cell | 2.46e-18 | 7 |
astrocyte of the cerebellum | 9.60e-17 | 3 |
leptomeningeal cell | 3.64e-16 | 3 |
central nervous system pericyte | 1.72e-11 | 2 |
fibroblast of choroid plexus | 7.83e-11 | 2 |
glial cell (sensu Vertebrata) | 2.45e-10 | 15 |
glial cell | 2.45e-10 | 15 |
glioblast | 2.45e-10 | 15 |
glioblast (sensu Vertebrata) | 2.45e-10 | 15 |
neuron associated cell | 3.51e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 3.51e-09 | 17 |
neural cell | 2.48e-08 | 25 |
astrocyte of the cerebral cortex | 1.81e-07 | 3 |
nucleus pulposus cell of intervertebral disc | 4.45e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood-cerebrospinal fluid barrier | 3.64e-16 | 3 |
vascular plexus | 7.83e-11 | 2 |
ventricle of nervous system | 7.83e-11 | 2 |
choroid plexus | 7.83e-11 | 2 |
brain ventricle | 7.83e-11 | 2 |
ventricular system of brain | 7.83e-11 | 2 |
ventricular system of central nervous system | 7.83e-11 | 2 |
cerebellum | 1.37e-08 | 6 |
rhombic lip | 1.37e-08 | 6 |
nucleus pulposus | 4.45e-07 | 3 |
axial mesoderm | 4.45e-07 | 3 |
notochord | 4.45e-07 | 3 |
chordamesoderm | 4.45e-07 | 3 |