FFCP PHASE1:Hg19::chr7:27190547..27190591,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:27190547..27190591,-
|short_description=p1@HOXA6
|description=CAGE_peak_1_at_HOXA6_5end
|association_with_transcript=-325bp_to_ENST00000521478_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3203 | |EntrezGene=3203 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5107 | |HGNC=5107 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-325bp_to_ENST00000521478_5end | |||
|cluster_id=chr7:27190547..27190591,- | |||
|description=CAGE_peak_1_at_HOXA6_5end | |||
|id=chr7:27190547..27190591,- | |||
|ontology_enrichment_celltype=CL:0000066!4.40e-07!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.78e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.25e-07;30 | |||
|ontology_enrichment_disease=DOID:14566!1.26e-27!239;DOID:162!2.38e-27!235;DOID:0050687!2.01e-20!143;DOID:305!1.00e-15!106;DOID:0050686!4.24e-13!137;DOID:7!3.65e-07!39;DOID:0050615!8.94e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:3905;7.26e-08;9!DOID:0050615;1.42e-07;16!DOID:0050687;1.54e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.06e-26,235;DOID:14566,1.74e-25,239;DOID:0050687,3.20e-20,143;DOID:305,1.01e-16,106;DOID:0050686,5.78e-13,137;DOID:3905,4.24e-08,9;DOID:7,4.42e-08,39;DOID:0050615,9.39e-08,16;DOID:1324,8.80e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0001008!2.15e-09!45;UBERON:0000489!2.63e-09!32;UBERON:0006554!6.38e-09!44;UBERON:0005177!4.65e-08!107;UBERON:0002113!9.18e-07!27;UBERON:0003918!9.18e-07!27;UBERON:0005095!9.18e-07!27;UBERON:0007687!9.18e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0000489;3.93e-08;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,1.92e-08,31;UBERON:0001008,3.39e-07,48;UBERON:0005177,4.60e-07,101 | |||
|phase1_expression=0.54503513781167,0.214100523890983,1.26858963686374,0,0,2.61701557230111,0,0.631719873426831,1.04474251279935,0.737201809504527,0,0,0,0.618831764800233,0.662794751455832,0,0,0,0,0,0,0,0,0,0,2.75088260692625,1.88831355734875,1.33808328233255,0,0,0.154816123316076,0,0,0,7.66925285744986,3.12772311472327,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.434539556882471,0.795285947051099,5.35298357332899,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,1.03366703667732,0.71153252537342,1.33888245105868,0.402829317109147,0.760272105718513,0.24406205754817,1.47065232138347,0,0.892997282840798,0.898117490504679,1.57656072676651,0,0.949265659568129,0.183201743930407,0,0,0,0.993943903390637,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448346041655403,0.352303495931295,0.161872944368132,0.421352420106746,0,0,0,0,0,0.910161361938026,1.43723628363248,0,0,0,0,0,0,0,0.358779271377724,0.427114777637135,0.847727604638247,0,0.618315175430633,0.257640540045629,0.930584281657949,0.506328996723799,0.876933046450788,0.757301322732344,1.28869858099219,0,1.06502877754984,0.403008392910561,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0647612003586,0.842923450390509,0.964044119533928,0.55146986366197,0.871517776369625,0.949082476444386,0.539325232640658,0.588664395376038,0,0,0,1.2347220339942,1.47008711385542,0,0,0,0,4.18160691046586,0,0,0,0.402115889646523,0,0,0,0,0,0,1.87676382089396,0,0.951270761172991,0.790204397959275,3.43394464837949,0,0,0,0,0,0,0.268675568108545,0.290633938513962,0,0,0.088048434013226,0.207328115540772,0,0.12624243342638,1.33345578013555,0.381988425558278,0,0,1.7480673759565,0,0,0,0,0,0,0,0,0.26593811658487,0,0.514414748524284,0,0.799266537048298,0,1.62786481617433,1.64648067356154,0.325736184293735,0,0.791951872933429,0.602878754119172,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0.579125226670317,0,0.179060963239896,6.05259777565047,0,0.215627574859517,0.256686072559497,0.254094624222463,0,0,0,0,0,0,0,0.49076596687656,1.00034104211935,0.542530047399471,0,0,0,0,0.300946099727719,0,0,1.32845119707087,0.368738337083406,0,0,0,0,0.215714200818617,0,0,1.66435439510497,0.604780586659361,0.496215615637554,0.306923946576125,1.12264037773229,1.53766979106841,1.53512174720011,0.804269605718038,0,1.3878872442239,0.532685175939381,0.98552587216571,0,0.581051892299796,1.69203229428271,0,1.93370076765382,0.459257792658427,0.910455840033585,0.262248829918848,1.80479845162965,0.693138033939733,1.56869953835371,1.46139224653261,1.05551628892876,1.13733384070897,0.510281115829547,0.431831832204279,0,0.541892875087706,0.501689773854853,2.80363900349542,2.49322802678617,0.671624264166535,0,0,0,0,0,0.309123034943167,3.02179233900533,3.4653989966647,0.574265537996172,0.650060246036521,0,1.45006077438183,0.616194468458578,0.460511024178389,0,0.322260734604821,0.290033387828457,0.681813019328807,1.24644849905432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0.42793898803392,0,0,0.179872457583315,0.823611089208164,0.235624804691373,0,0,0,0,0.974853958525138,1.05650146756755,0.136499911407986,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0.294747123039363,0.7133421029625,0.354761064070598,0.633322905892992,1.31717957183961,0,0,0,0,0,0.470719003883896,1.29151611801369,0,1.33029046061003,0.689170200620878,0,0,0,0,0.411362273086194,0,0,0,1.38871292465715,1.92495971052672,0.735120647943095,0,0,3.55709216742071,6.53647718188172,0.399158742865633,0,1.05836791361941,0.324621940274555,1.68478306868075,0,0.626719583092093,0,1.35433422241283,2.40882112655549,0.605399121573143,0,1.71752672377882,0.307240764308458,1.3420566473545,1.66849141711908,1.75849285861836,0,0,1.35227839237992,0,1.4098700508785,8.60846485877811,0.293016358543788,5.70394452222713,0,3.97790605528978,0,0,0,0,0,0,3.95529298144223,0.211125408127993,0.796991953004279,0.552567831062295,4.28285671352269,5.11343412510774,0.615424027305347,0,0,3.40140231883657,0,0.789147245095469,0,0,0,0,0,0,0,0.724999575434793,0,1.27126825146383,3.78220290828698,15.1687084226244,3.2076507472158,4.68787486319889,0,0,0,0,0,0,1.74301541630384,1.67308493134324,1.00035336054936,0,0.69169171316418,1.07709173291727,0.869178975376065,0.31900115973192,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0.476809736941136,1.26598838716816,1.14262965711403,1.83758992864123,0.216388639742091,0.995261931078505,0.530745387020035,0.611030144933625,2.37216902944498,4.2011739241811,3.65476823269094,0.067401132980677,0,0,4.56136973039165,5.47860933009851,0,3.55125962564451,0,0,0,0.300646838828985,1.9700756365477,1.99396161812156,2.97892760287949,0.941798755221676,4.77889719091835,0.569219092059585,0.138674673013139,0.347119476670262,2.25382514053069,1.48000651186684,2.97035336011451,0.51595809741485,1.54810130062536,2.92357268344742,2.54557916864949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| ||
|short_description=p1@HOXA6 | |||
}} | }} |
Latest revision as of 01:35, 18 September 2015
Short description: | p1@HOXA6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HOXA6_5end |
Coexpression cluster: | NA |
Association with transcript: | -325bp_to_ENST00000521478_5end |
EntrezGene: | HOXA6 |
HGNC: | 5107 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.78e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 1.92e-08 | 31 |
renal system | 3.39e-07 | 48 |
trunk region element | 4.60e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.06e-26 | 235 |
disease of cellular proliferation | 1.74e-25 | 239 |
cell type cancer | 3.20e-20 | 143 |
carcinoma | 1.01e-16 | 106 |
organ system cancer | 5.78e-13 | 137 |
lung carcinoma | 4.24e-08 | 9 |
disease of anatomical entity | 4.42e-08 | 39 |
respiratory system cancer | 9.39e-08 | 16 |
lung cancer | 8.80e-07 | 15 |