FFCP PHASE1:Hg19::chr7:47420544..47420578,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:47420544..47420578,-
|short_description=p@chr7:47420544..47420578,-
|description=CAGE_peak_at_chr7:47420544..47420578,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:47420544..47420578,- | |||
|description=CAGE_peak_at_chr7:47420544..47420578,- | |||
|id=chr7:47420544..47420578,- | |||
|ontology_enrichment_celltype=CL:0002251!5.36e-09!21;CL:0002150!5.22e-07!3;CL:0000861!5.22e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;5.27e-09;5 | |||
|ontology_enrichment_disease=DOID:1749!5.18e-10!14;DOID:305!1.02e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:3151;9.56e-12;1!DOID:3149;9.56e-12;1!DOID:1749;1.04e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,9.57e-12,1;DOID:3149,9.57e-12,1;DOID:1749,1.27e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0003729!6.52e-12!5;UBERON:0000974!5.82e-11!10;UBERON:0003343!2.67e-10!4;UBERON:0004785!2.67e-10!4;UBERON:0004119!7.02e-09!169;UBERON:0000925!7.02e-09!169;UBERON:0006595!7.02e-09!169;UBERON:0001004!1.00e-08!72;UBERON:0000344!1.72e-08!12;UBERON:0001007!2.26e-08!155;UBERON:0001555!2.26e-08!155;UBERON:0007026!2.26e-08!155;UBERON:0000166!1.52e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000974;9.14e-16;6!UBERON:0002171;1.37e-11;1!UBERON:0006518;1.37e-11;1!UBERON:0008949;1.37e-11;1!UBERON:0000101;1.37e-11;1!UBERON:0002167;1.37e-11;1!UBERON:0003343;3.12e-11;4!UBERON:0004785;3.12e-11;4!UBERON:0000997;3.63e-11;1!UBERON:0005056;3.63e-11;1!UBERON:0004176;3.63e-11;1!UBERON:0002046;5.27e-09;5!UBERON:0000160;5.91e-09;17!UBERON:0000059;1.32e-08;11!UBERON:0002048;1.76e-07;22!UBERON:0000117;1.76e-07;22!UBERON:0000171;1.76e-07;22!UBERON:0000170;1.76e-07;22!UBERON:0005409;4.82e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.31e-11,1;UBERON:0006518,1.31e-11,1;UBERON:0008949,1.31e-11,1;UBERON:0000101,1.31e-11,1;UBERON:0002167,1.31e-11,1;UBERON:0003343,3.29e-11,4;UBERON:0004785,3.29e-11,4;UBERON:0000997,6.00e-11,1;UBERON:0005056,6.00e-11,1;UBERON:0000974,1.08e-09,10;UBERON:0001007,1.61e-09,145;UBERON:0001555,1.61e-09,145;UBERON:0007026,1.61e-09,145;UBERON:0000160,5.43e-09,17;UBERON:0002046,6.19e-09,5;UBERON:0004117,6.19e-09,5;UBERON:0007689,6.19e-09,5;UBERON:0007123,6.19e-09,5;UBERON:0003091,6.19e-09,5;UBERON:0000059,1.32e-08,11;UBERON:0004119,1.93e-08,160;UBERON:0000925,1.93e-08,160;UBERON:0006595,1.93e-08,160;UBERON:0002048,1.60e-07,22;UBERON:0000117,1.60e-07,22;UBERON:0000171,1.60e-07,22;UBERON:0000170,1.60e-07,22;UBERON:0005597,1.60e-07,22;UBERON:0000118,1.60e-07,22 | |||
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| ||
|short_description=p@chr7:47420544..47420578,- | |||
}} | }} |
Latest revision as of 10:29, 31 July 2015
Short description: | p@chr7:47420544..47420578, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:47420544..47420578, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 1.31e-11 | 1 |
right lung lobe | 1.31e-11 | 1 |
lower lobe of lung | 1.31e-11 | 1 |
lobe of lung | 1.31e-11 | 1 |
right lung | 1.31e-11 | 1 |
mucosa of oral region | 3.29e-11 | 4 |
respiratory system mucosa | 3.29e-11 | 4 |
mammalian vulva | 6.00e-11 | 1 |
external female genitalia | 6.00e-11 | 1 |
neck | 1.08e-09 | 10 |
digestive system | 1.61e-09 | 145 |
digestive tract | 1.61e-09 | 145 |
primitive gut | 1.61e-09 | 145 |
intestine | 5.43e-09 | 17 |
thyroid gland | 6.19e-09 | 5 |
pharyngeal pouch | 6.19e-09 | 5 |
thyroid diverticulum | 6.19e-09 | 5 |
pharyngeal pouch 2 | 6.19e-09 | 5 |
thyroid primordium | 6.19e-09 | 5 |
large intestine | 1.32e-08 | 11 |
endoderm-derived structure | 1.93e-08 | 160 |
endoderm | 1.93e-08 | 160 |
presumptive endoderm | 1.93e-08 | 160 |
lung | 1.60e-07 | 22 |
respiratory tube | 1.60e-07 | 22 |
respiration organ | 1.60e-07 | 22 |
pair of lungs | 1.60e-07 | 22 |
lung primordium | 1.60e-07 | 22 |
lung bud | 1.60e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 9.57e-12 | 1 |
keratoacanthoma | 9.57e-12 | 1 |
squamous cell carcinoma | 1.27e-11 | 14 |