FFCP PHASE1:Hg19::chr10:13570971..13571042,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222389 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23514 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000466271_5end | |||
|cluster_id=chr10:13570971..13571042,- | |||
|description=CAGE_peak_1_at_BEND7_5end | |||
|id=chr10:13570971..13571042,- | |||
|ontology_enrichment_celltype=CL:0000066!7.88e-15!254;CL:0002139!5.67e-08!24;CL:1000497!8.70e-08!18;CL:0002518!8.70e-08!18;CL:0000213!9.90e-08!57;CL:0000215!9.90e-08!57;CL:0000071!6.94e-07!18;CL:0002546!6.94e-07!18;CL:0002078!8.27e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:1000497;2.31e-09;17!CL:0002518;2.31e-09;17!CL:1000449;5.67e-08;15!CL:0002139;6.42e-08;24!CL:1000507;4.30e-07;10!CL:1000494;4.30e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.21e-14,253;CL:1000497,8.24e-10,17;CL:0002518,8.24e-10,17;CL:1000449,2.17e-08,15;CL:0000213,7.50e-08,58;CL:0000215,7.50e-08,58;CL:0002139,8.15e-08,24;CL:1000507,3.13e-07,10;CL:1000494,3.13e-07,10;CL:0002078,9.60e-07,45 | |||
|ontology_enrichment_development_v019=UBERON:0003104;8.00e-08;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.53e-17!115;UBERON:0004111!5.92e-15!241;UBERON:0005177!5.84e-14!107;UBERON:0000025!6.52e-13!194;UBERON:0000466!1.04e-12!126;UBERON:0005172!1.34e-12!55;UBERON:0005173!1.34e-12!55;UBERON:0000468!1.87e-12!659;UBERON:0009569!2.77e-12!113;UBERON:0002417!9.18e-12!61;UBERON:0000916!9.18e-12!61;UBERON:0000489!1.07e-11!32;UBERON:0000477!2.47e-11!286;UBERON:0000475!4.36e-11!365;UBERON:0000467!6.85e-11!625;UBERON:0002113!7.20e-11!27;UBERON:0003918!7.20e-11!27;UBERON:0005095!7.20e-11!27;UBERON:0007687!7.20e-11!27;UBERON:0000480!1.18e-10!626;UBERON:0000119!1.61e-10!312;UBERON:0000483!1.74e-10!309;UBERON:0001008!2.25e-10!45;UBERON:0000481!3.10e-10!347;UBERON:0003103!3.26e-10!69;UBERON:0006554!8.15e-10!44;UBERON:0000464!1.19e-09!104;UBERON:0003064!1.85e-08!37;UBERON:0002553!3.82e-08!70;UBERON:0000064!1.01e-07!219;UBERON:0000080!1.75e-07!18;UBERON:0002120!1.75e-07!18;UBERON:0004875!1.75e-07!18;UBERON:0005721!1.75e-07!18;UBERON:0005754!1.75e-07!18;UBERON:0007297!1.75e-07!18;UBERON:0000062!2.09e-07!511;UBERON:0000058!3.21e-07!26;UBERON:0001048!3.28e-07!168;UBERON:0006555!3.39e-07!17;UBERON:0005103!3.39e-07!17;UBERON:0000083!3.39e-07!17;UBERON:0009201!3.39e-07!17;UBERON:0004819!3.39e-07!17;UBERON:0006553!3.39e-07!17;UBERON:0003074!3.39e-07!17;UBERON:0003060!3.39e-07!17;UBERON:0003075!3.45e-07!86;UBERON:0007284!3.45e-07!86;UBERON:0003886!3.63e-07!63;UBERON:0003914!4.29e-07!118;UBERON:0004876!6.29e-07!20;UBERON:0001986!6.94e-07!18;UBERON:0004638!6.94e-07!18;UBERON:0004852!6.94e-07!18;UBERON:0003887!8.72e-07!21;UBERON:0004119!9.03e-07!169;UBERON:0000925!9.03e-07!169;UBERON:0006595!9.03e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000489;5.82e-13;29!UBERON:0002113;7.48e-12;24!UBERON:0011143;7.48e-12;24!UBERON:0006554;6.75e-10;30!UBERON:0001008;6.75e-10;30!UBERON:0005172;8.94e-09;52!UBERON:0005173;8.94e-09;52!UBERON:0006555;5.67e-08;15!UBERON:0004819;5.67e-08;15!UBERON:0001285;5.67e-08;15!UBERON:0007684;5.67e-08;15!UBERON:0004211;4.30e-07;10!UBERON:0009773;4.30e-07;10!UBERON:0001231;4.30e-07;10!UBERON:0004810;4.30e-07;10!UBERON:0002417;5.35e-07;58!UBERON:0000916;5.35e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.78e-18,114;UBERON:0005177,1.70e-15,101;UBERON:0005172,3.79e-15,54;UBERON:0005173,3.79e-15,54;UBERON:0000489,4.21e-14,31;UBERON:0002417,2.90e-13,60;UBERON:0000916,2.90e-13,60;UBERON:0002113,3.04e-13,26;UBERON:0003918,3.04e-13,26;UBERON:0011143,3.04e-13,26;UBERON:0005095,3.04e-13,26;UBERON:0007687,3.04e-13,26;UBERON:0009569,3.76e-12,112;UBERON:0004111,4.93e-12,240;UBERON:0000025,2.04e-11,192;UBERON:0003103,3.31e-11,68;UBERON:0001008,4.49e-11,48;UBERON:0006554,1.82e-10,47;UBERON:0006555,4.05e-09,16;UBERON:0004819,4.05e-09,16;UBERON:0004211,2.17e-08,15;UBERON:0009773,2.17e-08,15;UBERON:0001231,2.17e-08,15;UBERON:0001285,2.17e-08,15;UBERON:0007684,2.17e-08,15;UBERON:0004208,2.17e-08,15;UBERON:0004810,3.13e-07,10 | |||
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| |||
|short_description=p1@BEND7 | |||
}} |
Latest revision as of 06:30, 17 September 2015
Short description: | p1@BEND7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BEND7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000466271_5end |
EntrezGene: | BEND7 |
HGNC: | 23514 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.21e-14 | 253 |
kidney cell | 8.24e-10 | 17 |
kidney epithelial cell | 8.24e-10 | 17 |
epithelial cell of nephron | 2.17e-08 | 15 |
lining cell | 7.50e-08 | 58 |
barrier cell | 7.50e-08 | 58 |
endothelial cell of vascular tree | 8.15e-08 | 24 |
kidney tubule cell | 3.13e-07 | 10 |
nephron tubule epithelial cell | 3.13e-07 | 10 |
meso-epithelial cell | 9.60e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.78e-18 | 114 |
trunk region element | 1.70e-15 | 101 |
abdomen element | 3.79e-15 | 54 |
abdominal segment element | 3.79e-15 | 54 |
cavitated compound organ | 4.21e-14 | 31 |
abdominal segment of trunk | 2.90e-13 | 60 |
abdomen | 2.90e-13 | 60 |
kidney | 3.04e-13 | 26 |
kidney mesenchyme | 3.04e-13 | 26 |
upper urinary tract | 3.04e-13 | 26 |
kidney rudiment | 3.04e-13 | 26 |
kidney field | 3.04e-13 | 26 |
subdivision of trunk | 3.76e-12 | 112 |
anatomical conduit | 4.93e-12 | 240 |
tube | 2.04e-11 | 192 |
compound organ | 3.31e-11 | 68 |
renal system | 4.49e-11 | 48 |
urinary system structure | 1.82e-10 | 47 |
excretory tube | 4.05e-09 | 16 |
kidney epithelium | 4.05e-09 | 16 |
nephron epithelium | 2.17e-08 | 15 |
renal tubule | 2.17e-08 | 15 |
nephron tubule | 2.17e-08 | 15 |
nephron | 2.17e-08 | 15 |
uriniferous tubule | 2.17e-08 | 15 |
nephrogenic mesenchyme | 2.17e-08 | 15 |
nephron tubule epithelium | 3.13e-07 | 10 |