FFCP PHASE1:Hg19::chr11:32456954..32456965,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7490 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12796 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-21bp_to_ENST00000379077_5end | |||
|cluster_id=chr11:32456954..32456965,- | |||
|coexpression_cluster_id=C1633 | |||
|description=CAGE_peak_4_at_WT1_5end | |||
|id=chr11:32456954..32456965,- | |||
|ontology_enrichment_celltype=CL:1000507!3.60e-12!12;CL:1000494!3.60e-12!12;CL:1000449!1.78e-08!16;CL:0000077!8.01e-08!19;CL:1000497!2.93e-07!18;CL:0002518!2.93e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000746;3.84e-14;3!CL:1000507;6.13e-11;10!CL:1000494;6.13e-11;10!CL:0000737;1.01e-10;4!CL:0000650;1.96e-10;2!CL:1000500;1.96e-10;2!CL:1000618;1.96e-10;2!CL:1001318;1.96e-10;2!CL:0002173;1.96e-10;2!CL:1000449;3.47e-07;15!CL:0000632;7.35e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,5.13e-14,3;CL:0000513,5.13e-14,3;CL:1000507,5.77e-11,10;CL:1000494,5.77e-11,10;CL:0000737,1.26e-10,4;CL:0000650,2.02e-10,2;CL:1000500,2.02e-10,2;CL:1000618,2.02e-10,2;CL:1001318,2.02e-10,2;CL:0002173,2.02e-10,2;CL:1000449,3.34e-07,15;CL:0000632,6.36e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000513;3.84e-14;3!UBERON:0005795;6.02e-07;10 | |||
|ontology_enrichment_disease=DOID:8692!2.64e-15!31;DOID:1240!2.45e-12!39;DOID:0050686!4.84e-09!137;DOID:14566!8.03e-09!239;DOID:2531!4.80e-08!51;DOID:0060083!4.80e-08!51;DOID:2394!9.49e-08!14;DOID:162!2.66e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.52e-12;31!DOID:1240;6.64e-10;39!DOID:2531;9.43e-07;51!DOID:0060083;9.43e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,9.20e-12,31;DOID:1240,7.43e-11,39;DOID:2531,8.29e-08,51;DOID:0060083,8.29e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0009773!3.60e-12!12;UBERON:0001231!3.60e-12!12;UBERON:0004810!3.60e-12!12;UBERON:0005172!6.07e-11!55;UBERON:0005173!6.07e-11!55;UBERON:0003886!1.88e-10!63;UBERON:0003887!2.87e-10!21;UBERON:0003103!3.50e-10!69;UBERON:0002417!5.20e-10!61;UBERON:0000916!5.20e-10!61;UBERON:0002113!2.24e-09!27;UBERON:0003918!2.24e-09!27;UBERON:0005095!2.24e-09!27;UBERON:0007687!2.24e-09!27;UBERON:0006555!2.72e-09!17;UBERON:0005103!2.72e-09!17;UBERON:0000083!2.72e-09!17;UBERON:0009201!2.72e-09!17;UBERON:0004819!2.72e-09!17;UBERON:0006553!2.72e-09!17;UBERON:0003074!2.72e-09!17;UBERON:0003060!2.72e-09!17;UBERON:0002553!1.14e-08!70;UBERON:0000080!1.28e-08!18;UBERON:0002120!1.28e-08!18;UBERON:0004875!1.28e-08!18;UBERON:0005721!1.28e-08!18;UBERON:0005754!1.28e-08!18;UBERON:0007297!1.28e-08!18;UBERON:0004211!1.78e-08!16;UBERON:0001285!1.78e-08!16;UBERON:0007684!1.78e-08!16;UBERON:0003220!1.78e-08!16;UBERON:0004208!1.78e-08!16;UBERON:0000489!2.89e-08!32;UBERON:0001851!5.88e-08!16;UBERON:0003133!1.19e-07!48;UBERON:0003064!1.69e-07!37;UBERON:0004876!1.76e-07!20;UBERON:0003134!5.83e-07!37;UBERON:0000474!5.83e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;6.13e-11;10!UBERON:0009773;6.13e-11;10!UBERON:0001231;6.13e-11;10!UBERON:0004810;6.13e-11;10!UBERON:0003567;1.96e-10;2!UBERON:0003838;1.96e-10;2!UBERON:0003586;1.96e-10;2!UBERON:0005169;1.96e-10;2!UBERON:0002321;1.96e-10;2!UBERON:0005215;1.96e-10;2!UBERON:0002303;1.96e-10;2!UBERON:0002319;1.96e-10;2!UBERON:0005172;7.45e-08;52!UBERON:0005173;7.45e-08;52!UBERON:0006555;3.47e-07;15!UBERON:0004819;3.47e-07;15!UBERON:0001285;3.47e-07;15!UBERON:0007684;3.47e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,5.77e-11,10;UBERON:0003567,2.02e-10,2;UBERON:0003838,2.02e-10,2;UBERON:0003586,2.02e-10,2;UBERON:0005169,2.02e-10,2;UBERON:0002321,2.02e-10,2;UBERON:0005215,2.02e-10,2;UBERON:0002303,2.02e-10,2;UBERON:0002319,2.02e-10,2;UBERON:0005172,2.96e-09,54;UBERON:0005173,2.96e-09,54;UBERON:0002417,4.37e-08,60;UBERON:0000916,4.37e-08,60;UBERON:0004211,3.34e-07,15;UBERON:0009773,3.34e-07,15;UBERON:0001231,3.34e-07,15;UBERON:0001285,3.34e-07,15;UBERON:0007684,3.34e-07,15;UBERON:0004208,3.34e-07,15;UBERON:0006555,9.89e-07,16;UBERON:0004819,9.89e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,3.35350429851818,2.30152611318355,0,0,0,0,0,0,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.404132016209064,0.980771418680752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,6.5851841813024,1.47008711385542,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,2.41151501647669,0.871533458600294,3.39908170018994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,1.35359883872224,0.847168708148562,3.13739907670742,1.46139224653261,0.844413031143006,0,0,0,0,4.33514300070165,5.01689773854853,0.509752546090077,0.831076008928724,0.223874754722178,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.571890581771475,0,0,0,0,0.179872457583315,0,0.353437207037059,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,2.48332744849418,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06712765022621,0,1.59663497146253,1.7235483311913,1.2700414963433,0,1.40398589056729,4.10822422259746,0.94007937463814,0,0.50787533340481,0.802940375518498,0,0,0,0.307240764308458,0,0.166849141711909,0,1.39203086947621,0,0.270455678475983,5.32915148796512,0,0,0,0.121360521749513,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0.818149460017238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0.31900115973192,0.366390373607449,0,0,0.941881538370149,0.664846727600626,1.35357396370308,0.588187602953219,1.00692952185506,0.189753732724185,0,0,0,0,0,0,0.265372693510018,0,0,0.123563938946503,0.104421949505455,0,0.802577647298789,0,0,0,0,0,0,0,0,0.300646838828985,0.311064574191741,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432271251462318,0.229073192331831,0,0,0.745515213392595,0,0,0,0.101998217636322,0.577901179803038,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0.223171457441873,0.470284307407084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,2.6751839948849,0,0,0,0,0,0,0.542999601753713,1.72844298240254,1.30634944043764,0,1.06720276974141,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,2.11739237728355,0,0,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0.776314784381297,2.90294345488599,0.53168342911599,0,1.6528336989694,1.52322084867518,0.406870733204662,0,2.7926744831047,0.464033759878494,0,0.400027764663154,0,0,0,0.385239660814607,2.57329909649911,0.521988583930423,0.226705925512272,0.463044948647668,0,0,0,0,0.706756583783524,4.05119480368921,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0.853533837553127,0,0.567515953566836,0,0,0,0,0.539124056983409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,5.56556429784504,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709618961301111,0,0,0,0,0,0.222462803784138,0,0,0,0.913158720509496,0,0,0,0,4.88213986546126,0,1.60342272946051,0,0,0,0,0,0.170426809518315,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,1.2217909337381,2.96506284678455,0,0,0,0,0,0,0,0.788857810965923,0,0,0.5290268405154,0,0,0,0.252332849670158,0,0,0.101988829741982,0,0,0,1.06090177505535,2.67964130156179,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0.106727345877715,0,0,0,1.34465588601153,3.25516942652591,0,0.201273793591026,0 | |||
|short_description=p4@WT1 | |||
}} |
Latest revision as of 15:29, 17 September 2015
Short description: | p4@WT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_WT1_5end |
Coexpression cluster: | C1633_uterus_kidney_ovary_Hepatic_Mesothelial_Renal_spleen |
Association with transcript: | -21bp_to_ENST00000379077_5end |
EntrezGene: | WT1 |
HGNC: | 12796 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 5.13e-14 | 3 |
cardiac muscle myoblast | 5.13e-14 | 3 |
kidney tubule cell | 5.77e-11 | 10 |
nephron tubule epithelial cell | 5.77e-11 | 10 |
striated muscle cell | 1.26e-10 | 4 |
mesangial cell | 2.02e-10 | 2 |
kidney interstitial cell | 2.02e-10 | 2 |
juxtaglomerular complex cell | 2.02e-10 | 2 |
renal interstitial pericyte | 2.02e-10 | 2 |
extraglomerular mesangial cell | 2.02e-10 | 2 |
epithelial cell of nephron | 3.34e-07 | 15 |
hepatic stellate cell | 6.36e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 5.77e-11 | 10 |
abdomen connective tissue | 2.02e-10 | 2 |
abdominal segment connective tissue | 2.02e-10 | 2 |
trunk connective tissue | 2.02e-10 | 2 |
interstitial tissue | 2.02e-10 | 2 |
extraglomerular mesangium | 2.02e-10 | 2 |
kidney interstitium | 2.02e-10 | 2 |
juxtaglomerular apparatus | 2.02e-10 | 2 |
mesangium | 2.02e-10 | 2 |
abdomen element | 2.96e-09 | 54 |
abdominal segment element | 2.96e-09 | 54 |
abdominal segment of trunk | 4.37e-08 | 60 |
abdomen | 4.37e-08 | 60 |
nephron epithelium | 3.34e-07 | 15 |
renal tubule | 3.34e-07 | 15 |
nephron tubule | 3.34e-07 | 15 |
nephron | 3.34e-07 | 15 |
uriniferous tubule | 3.34e-07 | 15 |
nephrogenic mesenchyme | 3.34e-07 | 15 |
excretory tube | 9.89e-07 | 16 |
kidney epithelium | 9.89e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 9.20e-12 | 31 |
leukemia | 7.43e-11 | 39 |
hematologic cancer | 8.29e-08 | 51 |
immune system cancer | 8.29e-08 | 51 |