FFCP PHASE1:Hg19::chr11:71903194..71903219,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2348 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3791 | |||
|TSSclassifier=strong | |||
|UniProt=P15328 | |||
|association_with_transcript=21bp_to_NM_016729,uc001osd.1_5end | |||
|cluster_id=chr11:71903194..71903219,+ | |||
|description=CAGE_peak_2_at_FOLR1_5end | |||
|id=chr11:71903194..71903219,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.06e-15!254;CL:0002076!3.42e-10!43;CL:0000223!5.80e-10!59 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.40e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.56e-11,253;CL:0002076,1.34e-09,42;CL:0000223,1.35e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.30e-11;29!UBERON:0006595;6.01e-08;86 | |||
|ontology_enrichment_disease=DOID:305!3.50e-22!106;DOID:0050687!2.54e-16!143;DOID:299!1.79e-12!25;DOID:162!1.09e-08!235;DOID:14566!5.50e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:299;3.11e-10;25!DOID:305;3.41e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.23e-20,106;DOID:0050687,1.41e-13,143;DOID:299,3.47e-10,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.75e-18!169;UBERON:0000925!5.75e-18!169;UBERON:0006595!5.75e-18!169;UBERON:0000077!2.85e-16!130;UBERON:0001007!1.09e-15!155;UBERON:0001555!1.09e-15!155;UBERON:0007026!1.09e-15!155;UBERON:0001004!3.27e-13!72;UBERON:0000065!7.73e-13!53;UBERON:0004921!8.71e-13!129;UBERON:0004185!8.71e-13!129;UBERON:0008947!4.20e-12!38;UBERON:0003258!4.20e-12!38;UBERON:0001041!2.81e-11!98;UBERON:0001737!2.48e-09!9;UBERON:0000072!4.75e-09!46;UBERON:0000062!7.06e-09!511;UBERON:0000464!1.10e-08!104;UBERON:0000466!1.20e-08!126;UBERON:0005177!1.01e-07!107;UBERON:0000481!1.16e-07!347;UBERON:0003104!2.94e-07!238;UBERON:0009142!2.94e-07!238;UBERON:0001557!5.77e-07!19;UBERON:0005911!1.00e-06!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.28e-13;9!UBERON:0001557;1.28e-13;9!UBERON:0000065;4.54e-10;44!UBERON:0001004;1.64e-07;65!UBERON:0000072;3.49e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.28e-15,160;UBERON:0000925,4.28e-15,160;UBERON:0006595,4.28e-15,160;UBERON:0001737,1.30e-13,9;UBERON:0001004,3.29e-13,74;UBERON:0001007,4.77e-13,145;UBERON:0001555,4.77e-13,145;UBERON:0007026,4.77e-13,145;UBERON:0000065,3.59e-12,54;UBERON:0008947,4.27e-12,38;UBERON:0003258,4.27e-12,38;UBERON:0004921,7.41e-11,118;UBERON:0001041,1.05e-10,87;UBERON:0001557,2.73e-09,19;UBERON:0000072,3.68e-08,47;UBERON:0003124,1.79e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.96587149201207,9.76921635161399,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.251085279189606,0,0,0,0,0,0.464448369948228,2.75826367343678,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0.087834785693126,14.9316146067392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92484646928281,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,1.18800285728205,0,0,0,0,0,0,0.877955241761676,0.612975591598039,0.150238058906597,0,0.358779271377724,1.06778694409284,0,0,0,0,0.18611685633159,0,0,0.252433774244115,0.0920498986422993,0,1.06502877754984,0,0,0,0,0,0.731842236777572,0.530119073285941,1.51052125730374,1.55491582523056,1.7662459561294,3.6497735907583,0,0,0,0,0,24.252894008168,21.0730862597627,16.8707720918437,24.3749679738591,24.6203771824419,16.1344020995546,28.0449120973142,24.920126070919,20.3915993181587,0,0,0.4115740113314,0,0,0,0,0,28.0413639878299,0,0,0,0,0,0,0,0,0.115930404975077,0.234817388471643,0,0,0,1.58040879591855,3.43394464837949,0,0.468008530278475,0.148631162288728,0,0.503946384596579,0,0.179117045405697,0.290633938513962,0,0,0,0.207328115540772,0.432359860250884,0.12624243342638,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0.195801157462741,2.74514739048685,0,0,0,0.606255142892519,1.66435439510497,1.81434175997808,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,14.6239934005863,0.802025881213139,0.0920809889358963,0.114814448164607,0,0,3.60959690325929,1.38627606787947,0,1.46139224653261,0.949964660035881,0,0,0,0,0.270946437543853,2.50844886927427,1.52925763827023,4.98645605357235,1.11937377361089,0,0,0.512900250232778,0.328014645699706,0.325378394664303,25.8632939235783,4.67004270573551,6.68326949356763,0,0,0,0.193341436584244,0.154048617114644,0,1.51620229732984,0,0.290033387828457,1.19317278382541,12.3754529548965,2.47927373041467,0.768760269460425,1.27612712494584,1.4162089319777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,4.02181365321472,2.17781969722645,23.5359501941948,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,3.18552280775341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,3.66379164797602,0,0.18714054040822,0,0.121360521749513,0,0,7.40107902686839,5.04839957415486,0,0,0,0,0,0,9.76315142430242,0,0,4.09074730008619,0,0,5.93131117572357,0.179021174675609,0,0.0986434056369336,0,0,0,0.185536196323703,0,4.16684417736373,0,2.17499872630438,0,5.08507300585533,0.236387681767936,0,0,0,0,0.241192877250816,0,0,0,0.438770794307945,0.762569244632931,0.139423744278603,15.7748029932784,0.113942055847001,63.8662015154927,75.5759365930281,68.9910811704751,51.9971890363029,39.3869651628008,42.6427820814908,0,0,0,2.03036094555463,2.35275041181287,0.839107934879214,0,0,0.210998064528027,8.16164040795739,51.4525180019545,1.08194319871046,0,0,0,0.296521128680622,0,0,2.76344645220776,0,0.234264445725339,0,15.0661756577709,0,5.52418163989147,0,0,0,0.150323419414493,0.414752765588989,0,0,0,0,8.25367683486399,0,1.56203764501618,1.07791637155815,0,2.09672001890436,0,97.2401129455306,125.055821534463,104.040284086416,0.775912131907355,0,0.677942222341597,0,0,0.0633107959558787,30.5060157066293,6.4127056201227,1.06726497369676,16.1845783761525,0,1.14536596165916,0,1.1524383839052,4.84584888705187,4.71388069233591,0.407712618220842,0.523014231561666,4.89591444654345,0,0,0,0,0,0,0,0,0,30.3512080758466,0,0,0.0671834724867263,0,1.16495949527454,0.0787831823072236,0,0,0.196854963029498,0,0,1.36203406111576,0.482259445395058,0,0.415440338029185,0,0,0.0607495566580247,0,17.9677012642172,8.02555198465471,0.316801009558219,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.339936274560377,0.146552233678082,0,0.129282956361551,0,0,8.45778026780006,85.002780403885,68.698281328554,53.022599084441,0,0,0,1.27668251554036,0,0,0.306345576763462,0,7.69565071626148,0,0,0,44.7259172638256,19.523513070486,2.54595252059672,3.32036723846954,0,0.303298235083296,0,0.235265819698172,0,0,0.298509605773748,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0.489473409012935,0,0,0,0,0,0,0.512483037175893,0.690860683462397,0,0,0,0,0,0.655219697692825,1.2288645437686,0.422624246717254,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,1.531227386766,0.385375350578757,0,0,0,0,0,0,0,9.32403325759743,4.36487976386639,0.366857197043358,0.115525666150338,0.381382095467167,0,6.16640288560452,11.6576008941349,0.20170506870352,3.90757005616546,74.9053146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| |||
|short_description=p2@FOLR1 | |||
}} |
Latest revision as of 00:46, 20 September 2015
Short description: | p2@FOLR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FOLR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_NM_016729, uc001osd.1_5end |
EntrezGene: | FOLR1 |
HGNC: | 3791 |
UniProt: | P15328 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.56e-11 | 253 |
endo-epithelial cell | 1.34e-09 | 42 |
endodermal cell | 1.35e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 4.28e-15 | 160 |
endoderm | 4.28e-15 | 160 |
presumptive endoderm | 4.28e-15 | 160 |
larynx | 1.30e-13 | 9 |
respiratory system | 3.29e-13 | 74 |
digestive system | 4.77e-13 | 145 |
digestive tract | 4.77e-13 | 145 |
primitive gut | 4.77e-13 | 145 |
respiratory tract | 3.59e-12 | 54 |
respiratory primordium | 4.27e-12 | 38 |
endoderm of foregut | 4.27e-12 | 38 |
subdivision of digestive tract | 7.41e-11 | 118 |
foregut | 1.05e-10 | 87 |
upper respiratory tract | 2.73e-09 | 19 |
segment of respiratory tract | 3.68e-08 | 47 |
chorion | 1.79e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.23e-20 | 106 |
cell type cancer | 1.41e-13 | 143 |
adenocarcinoma | 3.47e-10 | 25 |