FFCP PHASE1:Hg19::chr8:128748308..128748324,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:128748308..128748324,+
|short_description=p2@MYC
|description=CAGE_peak_2_at_MYC_5end
|association_with_transcript=0bp_to_NM_002467,uc003ysi.2_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4609 | |EntrezGene=4609 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7553 | |HGNC=7553 | ||
|TSSclassifier=strong | |||
|UniProt=P01106 | |UniProt=P01106 | ||
|association_with_transcript=0bp_to_NM_002467,uc003ysi.2_5end | |||
|cluster_id=chr8:128748308..128748324,+ | |||
|description=CAGE_peak_2_at_MYC_5end | |||
|id=chr8:128748308..128748324,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.98e-22!254;CL:0000012!2.23e-18!682;CL:0000548!3.63e-18!679;CL:0000004!3.63e-18!679;CL:0000255!3.63e-18!679;CL:0000220!6.60e-15!246;CL:0002321!1.53e-14!248;CL:0000003!7.32e-14!722;CL:0002371!1.45e-11!591;CL:0000144!4.51e-11!625;CL:0000063!2.07e-10!578;CL:0000076!3.07e-07!62;CL:0002076!4.79e-07!43;CL:0000222!4.91e-07!119;CL:0000223!4.91e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.08e-21,253;CL:0002321,5.15e-15,250;CL:0000076,2.00e-07,63;CL:0000222,2.20e-07,121;CL:0000223,6.78e-07,58;CL:0002076,7.05e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!5.86e-12!51;DOID:0060083!5.86e-12!51;DOID:1240!1.07e-11!39;DOID:8692!7.43e-11!31;DOID:162!7.61e-10!235;DOID:14566!2.51e-09!239;DOID:0050686!2.95e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.44e-10;31!DOID:1240;2.11e-09;39!DOID:2531;1.02e-07;51!DOID:0060083;1.02e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.83e-12,51;DOID:0060083,5.83e-12,51;DOID:1240,1.07e-11,39;DOID:8692,7.40e-11,31;DOID:162,6.54e-10,235;DOID:14566,2.17e-09,239;DOID:0050686,2.65e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.76e-10!238;UBERON:0009142!1.76e-10!238;UBERON:0003914!1.92e-07!118;UBERON:0001004!3.87e-07!72;UBERON:0000490!6.90e-07!138;UBERON:0000072!9.11e-07!46 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,7.05e-08,148;UBERON:0001004,1.93e-07,74;UBERON:0003914,3.02e-07,117;UBERON:0000072,4.66e-07,47;UBERON:0002100,6.07e-07,199;UBERON:0000486,7.54e-07,83;UBERON:0000065,9.45e-07,54;UBERON:0002049,9.85e-07,78;UBERON:0007798,9.85e-07,78 | |||
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| ||
|short_description=p2@MYC | |||
}} | }} |
Latest revision as of 06:35, 16 September 2015
Short description: | p2@MYC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MYC_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_002467, uc003ysi.2_5end |
EntrezGene: | MYC |
HGNC: | 7553 |
UniProt: | P01106 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.08e-21 | 253 |
embryonic cell | 5.15e-15 | 250 |
squamous epithelial cell | 2.00e-07 | 63 |
mesodermal cell | 2.20e-07 | 121 |
endodermal cell | 6.78e-07 | 58 |
endo-epithelial cell | 7.05e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 7.05e-08 | 148 |
respiratory system | 1.93e-07 | 74 |
epithelial tube | 3.02e-07 | 117 |
segment of respiratory tract | 4.66e-07 | 47 |
trunk | 6.07e-07 | 199 |
multilaminar epithelium | 7.54e-07 | 83 |
respiratory tract | 9.45e-07 | 54 |
vasculature | 9.85e-07 | 78 |
vascular system | 9.85e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.83e-12 | 51 |
immune system cancer | 5.83e-12 | 51 |
leukemia | 1.07e-11 | 39 |
myeloid leukemia | 7.40e-11 | 31 |
cancer | 6.54e-10 | 235 |
disease of cellular proliferation | 2.17e-09 | 239 |
organ system cancer | 2.65e-07 | 137 |