FFCP PHASE1:Hg19::chr11:93861993..93862102,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=24145 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8599 | |||
|TSSclassifier=strong | |||
|UniProt=Q96RD7 | |||
|association_with_transcript=0bp_to_ENST00000227638,ENST00000436171,NM_015368,uc001peq.2,uc001per.2_5end | |||
|cluster_id=chr11:93861993..93862102,+ | |||
|description=CAGE_peak_1_at_PANX1_5end | |||
|id=chr11:93861993..93862102,+ | |||
|ontology_enrichment_celltype=CL:0000144!7.91e-18!625;CL:0000012!8.27e-15!682;CL:0000548!1.17e-14!679;CL:0000004!1.17e-14!679;CL:0000255!1.17e-14!679;CL:0002371!2.44e-14!591;CL:0002057!2.35e-11!42;CL:0000557!1.45e-10!71;CL:0000034!2.14e-10!444;CL:0000723!8.06e-10!436;CL:0000003!1.79e-09!722;CL:0000860!4.01e-09!45;CL:0000048!6.18e-09!430;CL:0002009!1.34e-08!65;CL:0000839!2.09e-08!70;CL:0002194!3.96e-08!63;CL:0000576!3.96e-08!63;CL:0000040!3.96e-08!63;CL:0000559!3.96e-08!63;CL:0000063!5.04e-07!578;CL:0000219!6.33e-07!390;CL:0000221!9.62e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.32e-12;33!CL:0002057;2.32e-12;33!CL:0000473;1.08e-10;39!CL:0000234;1.08e-10;39!CL:0000576;1.87e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.16e-12,48;CL:0000234,5.16e-12,48;CL:0000557,5.61e-12,67;CL:0000860,2.35e-11,42;CL:0002057,2.35e-11,42;CL:0000034,2.44e-11,441;CL:0000723,9.77e-11,433;CL:0002009,6.94e-10,61;CL:0000048,8.33e-10,427;CL:0000839,1.33e-09,66;CL:0002194,2.19e-09,59;CL:0000576,2.19e-09,59;CL:0000040,2.19e-09,59;CL:0000559,2.19e-09,59;CL:0000219,1.06e-07,386;CL:0000766,8.98e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;5.37e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!6.81e-11!167;UBERON:0004765!3.07e-09!101;UBERON:0001434!3.07e-09!101;UBERON:0002371!4.34e-09!80;UBERON:0001474!1.64e-08!86;UBERON:0002390!9.65e-07!102;UBERON:0003061!9.65e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,6.98e-11,167;UBERON:0002371,3.03e-10,76;UBERON:0001474,1.47e-09,82;UBERON:0001434,2.59e-09,100;UBERON:0004765,3.35e-09,90;UBERON:0000926,3.08e-08,315;UBERON:0004120,3.08e-08,315;UBERON:0006603,3.08e-08,315;UBERON:0002390,1.58e-07,98;UBERON:0003061,1.58e-07,98 | |||
|phase1_expression=11.8090946525862,9.84862409898522,10.7125347112938,4.00293193412522,10.7270662662549,4.36169262050184,15.1979926900986,23.3736353167927,4.70134130759709,15.7269719360966,5.58240934377942,16.6015442818931,10.8144461073666,5.94078494208224,6.95934489028623,21.5144046864568,16.8754467846714,22.6396128020086,17.5655807564582,5.0479633811483,5.30401797235058,5.95563970808367,6.29719171688325,8.6230887795917,8.16027157366218,7.71775398054308,7.30695246104517,7.71365656874057,6.29382842958246,6.1412703695554,4.64448369948228,11.9524759182261,20.7832083956993,8.8740962440029,0.619737604642413,0.995184627411951,8.22081230137572,19.9438347071476,14.4392002178502,14.1057065965304,16.5697450937544,12.6318529747402,15.7121096256854,8.72389432677388,12.4699061417307,10.6736986922639,36.9562168680039,32.0710952657024,48.9336066014264,37.6877033942017,30.483124076963,39.0195679316166,47.91964962239,39.3745656986134,44.6907405761328,25.6009581777942,16.3743690034707,26.2926476800749,50.8099261335698,32.7347607617615,32.6061934157511,13.5239033076554,15.159237979244,15.7703157697097,60.3635216347455,38.5821952789975,31.1411124497787,41.9585270978761,40.6756676367757,29.754871724601,46.6157617027694,41.6153728665948,39.5577984301106,4.22510572623884,11.0554235981823,7.33805259279316,3.03287304095537,6.30742949934327,5.6253955343978,2.56511469367124,8.95125047395906,7.85455861187926,12.3197371122926,7.64594055766984,9.7846017924991,18.7761297929263,8.80871171479227,12.6445536789986,8.59358334620321,9.54053754535364,14.7995371968457,14.6809297342735,9.93910393125595,7.93027971474155,10.6496626966492,7.37475437370216,4.72103448273199,4.32311839024081,7.19605246498282,6.35308682484577,5.86660079940463,6.15482147455153,9.74133642039557,6.90744832688076,8.24896540929544,10.8551608345974,8.12411591295047,9.60684897942564,10.0145697621106,3.94650971048823,4.69795030235942,4.63684937176084,2.81744470007915,4.0131124213457,7.31748666634838,4.87230173599535,6.51474839123266,12.026960591892,6.32549230048757,9.5569624297229,10.4173352617027,8.55406840003537,7.82990619204418,7.29523683580185,8.74515085866421,6.39298580518846,7.39015197228942,12.2980113367087,12.8371293976084,12.4548987339207,12.1903433156981,6.70700859703636,11.1240428803871,5.42158728576849,6.51739283826656,6.95263291011954,2.3858578411533,5.83961844363163,11.3441780596881,14.4124108350667,9.31048728347136,5.30465255765736,7.28590576585084,5.93255108455087,2.59637914923747,4.70150290708022,4.25465473660369,5.24679373471752,5.14795419702115,4.82894751728434,4.77029777680092,7.74211135595512,4.16568601929113,7.91431118693613,5.03399323451887,4.67700671298115,2.71693456497854,6.46041897923322,7.47109151642091,4.35136796594071,5.63961043952806,4.56163263431108,3.66093086322254,5.8826092855339,6.48113558305408,4.19708722935175,2.2452937262617,3.60356737546631,3.06633274931766,2.84779697870439,6.77846452542507,1.31780417436063,0,8.72188104285069,10.933382937297,9.24402735151432,16.2863292400259,11.4734648299525,5.67469411517371,12.8955848032731,14.9448594021587,12.8267125176923,4.35695449559673,7.27437629176316,5.72116660897106,4.23800797405808,8.06646294271999,7.0296429550139,9.05264222807929,8.55707732316674,14.7954193746283,10.9214083738701,12.6260896607143,12.9214742166069,12.0450961040387,13.8802778562298,8.369388275237,20.1960485737949,30.4138323012625,9.10161361938026,10.0606539854273,11.9518640907387,11.7611408679646,9.97430815743058,8.77955241761676,9.19463387397059,26.5921364264676,13.1581332465624,8.9694817844431,14.0947876620254,17.8022796974032,10.5031883629541,11.2327256869898,6.69865404118636,8.56137539125313,8.77636927654584,7.89239741805709,8.58274832429989,11.7823870262143,8.72888706821584,7.81021103536552,5.84362169720314,11.5301202771132,22.804780673269,18.5467362001768,15.7742527463952,9.75789649036763,15.6385126619353,11.7355882298214,8.70752862129112,12.1114008420302,20.0737547491706,18.7739438795779,15.4377825166292,6.90674606762403,13.0023019848954,5.77503585335668,3.43089720115547,3.37169380156203,3.61516544825223,3.639701100169,3.4860711054785,2.84724742933316,2.56179485504312,3.13954344200554,3.8474715694639,4.42893272774789,11.2193419042757,8.6430542379594,2.94017422771084,13.9430538304014,20.6393715502301,5.31710916013264,6.62194649121976,10.4540172761647,15.9558063577629,34.0225884766739,8.99214026060957,20.4073813995611,13.4253245479868,7.81939932744779,9.35941306751621,15.8764476227801,10.4337364477569,11.1538259524031,2.16549671641611,3.70388410061289,4.37584550139576,3.95102198979638,6.86788929675898,16.9889734200304,6.55211942389866,10.9987060093659,34.6815185751075,27.549069024613,21.266264586358,14.6875977232671,16.2755005567819,8.05103626246943,22.1698457053175,8.80484340132261,27.5746393669227,22.7709526398799,30.5506688891839,13.906038849985,11.8416411923066,11.7217447210047,11.9750712215894,11.9279891535855,6.60754727256618,18.0070652557264,9.86753542239174,9.15516144549888,13.3475680194129,20.5542028054867,3.57656445851882,21.977871566456,16.488163228262,17.6812642749322,7.20180647933998,2.83698264046557,4.79559922228979,8.43570162583071,13.5655401347861,8.23240336780769,18.2412263204492,9.59558261604874,22.174652442136,17.7849232465156,5.22920075160176,17.49527345686,13.378615870531,15.0677127429638,12.6500363689819,11.9812427745791,9.18895486672911,2.85273810081437,12.8855362934145,7.60262393436419,11.2808406841134,3.58672460779287,16.5505838569619,11.2126338926949,11.4225302288976,8.63921722356376,37.7405576187103,13.9191986299985,31.4930578828576,19.7761013012481,0.749007023947182,0,2.07207756718018,7.11610651971011,2.50085260529839,6.78162559249339,15.5978146148105,14.4527480925701,8.98903765693428,11.011293009315,8.12554469264841,6.82222512167955,4.1389228517002,11.9560607736379,9.58719676416856,14.8570980740422,2.15381273209015,1.71571711905428,6.82334486205528,7.33428282783297,9.49875264450655,16.6720164295443,8.32177197552485,10.5836602665388,7.69134204238208,5.67809301165831,6.73584226639377,8.32904470162056,9.21073048320066,11.2597744800525,4.45254199334973,14.6499209112523,15.8029935528683,13.1403449622095,13.5006151587741,7.66988497835731,13.4153989046701,23.8602699660909,8.65561295997425,13.6629193315882,16.0240227845911,11.2766996865105,4.51199612907412,11.706331239871,9.41219723012226,7.30696123266303,14.1439182716453,4.54933536283586,4.76262374774244,8.42072072798343,3.08454505380579,7.58650025122788,5.01689773854853,7.39141191830611,4.15538004464362,5.1491193586101,1.53481913652154,2.87578996127391,4.87255237721139,7.21632220539353,5.85681110395745,7.31591182698828,6.50143200210238,8.00342149229703,27.5647458238163,16.9015663969496,11.2478750890912,9.86041326579644,8.62672255842009,12.5873013275426,15.575532690752,8.1639386099888,9.57110179833908,13.2953538769117,18.1625352719344,20.8258993354832,24.4081385553685,25.6501552114114,12.9481959495104,5.57814659156743,15.740617341532,7.6674099717666,10.1651081458109,7.45228442443831,16.5287268494264,15.3819101856254,12.8812398067792,9.30395923399168,10.440521015718,11.0565512475818,4.35026245229268,8.13084077264449,12.7281299170375,12.5591782431877,17.4476283855815,11.5305552489143,10.6031162111118,8.49166422607927,7.92551605865041,13.0590121434084,4.8763373908959,29.7330457350167,8.45201174054043,11.7389923810868,7.21167702963935,5.65040583101214,11.0273068709225,4.64407282668854,7.89211593456773,2.31510213706675,4.59126326432643,12.7833537486504,8.36523444869325,9.57765048609621,13.0504330505687,14.3443599879157,9.63011838999376,5.67617702512956,6.33322905892992,12.8425008254362,4.17420491142287,6.64875968465468,14.6257611342778,16.0872546128589,17.4225575778116,6.21349085126742,14.6371826708218,6.73885902670502,7.09488245658681,18.8373188169707,11.1638474031077,7.64637207142375,3.41788312304498,6.67048971281809,5.75907182320672,5.18778648954174,10.2605973075242,9.51750211553125,1.70918513803957,8.66231869737023,11.2718499351275,6.31730795427444,5.91503773203424,12.0941133692304,8.29016618189876,1.39705560002972,4.40462351304443,1.69338866179106,1.29848776109822,5.61594356226918,11.1834992726264,2.82023812391442,7.51903431270201,0.338583555603207,7.54763952987388,3.8341944366299,4.25846237690326,10.9921710321845,5.53033375755224,6.71028323677248,6.00656910162871,5.66625476665917,9.46580991243824,12.3087398947712,6.22048060494761,7.32758329595204,8.45922030527097,6.17563783347125,5.86032717087576,11.2865285227047,6.90948982520366,5.68272293612826,42.9740072527842,7.12715233998333,19.6582849343509,5.96488588659779,4.50142132513641,14.5814403580007,12.1954866927802,6.3337622438398,8.567663494796,8.01223355040328,7.306049687774,12.8858539952715,6.40040988397561,25.5052461882682,20.2203790081485,4.29650819221462,3.5810065915881,8.28604607350242,7.18449277040819,16.6705485216955,3.87733098438087,4.63840490809256,31.9382076801911,3.1251331330228,11.3697999995054,13.7749919332611,8.76209551798347,5.59358030644086,2.6002644994473,8.61858433103662,2.91604613383254,7.11862479226498,3.54296554325536,3.85908603601305,0,4.86548743697388,3.25102380848902,7.02033270892712,2.72346158797475,13.5241031950245,6.00212016329617,12.8754523107111,7.83917274919404,6.37279275309382,8.90908449760466,43.3841577235411,16.3959692189334,17.0571128325963,6.13159789174419,1.72678282034527,4.98635045700469,4.96310453357798,5.29368842657897,4.02771808742022,6.45162691262229,9.85406789678348,12.8708819362096,8.97780444875312,12.1563641433189,3.67860687561555,10.9478812418636,5.83819925722038,4.888241159469,22.8321269084079,17.6696432693499,14.7234948802692,3.84186457989859,6.42062117839031,4.2167600230561,4.56136973039165,7.43525551941941,5.34116834975004,2.36750641709634,6.04953580243319,32.1376399712015,6.00272506470636,29.1627433664116,11.0946364795054,6.64653872707185,5.95785520575898,3.7671950208867,5.97362148864794,7.6844577428044,9.98457645694598,8.33086744008628,6.5654906267633,22.3742160911635,4.54289337429278,11.3510781431267,4.547547570587,3.36210858596454,4.35211922382009,5.91633000579358,6.44269724847952,9.26521037200183,10.8263120470933,12.9164497606943,6.52101198345551,11.3419801986186,21.9635167489202,4.0556069000477,7.39295555453882,5.90770710331835,7.90302513544818,7.89336990165037,7.92301388934823,10.0644553808,10.1348434885222,6.25159347938625,5.54395085455366,6.11989305817931,11.5580235960608,3.60252173225874,5.20240439789574,34.4915787780825,32.2324081064968,6.57218385698286,5.86493042671734,6.41649187232714,34.4579051796871,8.18683902045863,7.2968428183217,13.1671159890705,7.79328280846025,20.537093361917,6.98975697164723,7.09048640765013,7.99433826297315,8.15582880635637,4.82294659422269,3.8102999429603,4.77137813885582,5.72054305668618,11.7349798379464,16.9173507014598,16.6176135211674,10.5737729029205,34.0472860005498,6.19645477911852,3.68978156359193,6.54087370583345,7.39609692703473,13.6224434110034,3.5857467866569,9.97959026061116,3.57347663186684,5.95882773328889,8.39086174260675,4.88699641578341,12.963322368019,10.1242081633917,14.3676229874985,5.58229141095505,9.20095317641277,7.70522222336855,9.23279072171919,10.6005511129777,3.87848869084652,5.55376927319298,6.50129983960452,4.22889013390003,10.5719538442018,11.1615056620763,5.38510771951354,4.46549419630756,3.35939774226505,3.53198535304598,10.8518013820931,72.8983856515095,32.0883064349056,47.7899099751,25.5740651953647,4.86867698375726,9.74674997963685,4.27091927156871,4.50687350543399,2.86704597845036,4.43716206147409,3.41530216177609,13.4198175888144,11.4981975325138,6.82421028937415,5.42384133735438,9.88116442732321,8.89836321033075,11.8835243460877,9.25379777898619,7.47882591511118,8.3220879225392,5.11388114242741,10.062716070103,11.567545880755,9.84012294106771,11.4935502060062,9.32623203496683,17.5947628487664,19.4342055939717,31.4862178514523,22.3578657901814,6.22059311761283,22.5965457374296,27.1307432142102,31.5540978894159,20.1826762449462,23.5985025258704,21.2762931266995,19.6561319387754,30.1621943921021,25.4781368767114,12.8008884692209,4.12074846219351,7.40848875285022,20.1895837165842,21.3808011752107,11.579845934246,10.7007659705737,9.97506072253998,12.0391686648394,11.2578884072975,7.70082016650396,8.33763907334625,8.11350983441216,18.3756711783716,13.503982678964,8.95394935461285,9.48093618775403,12.090061960592,17.0161575459334,4.00949464840019,4.09206648562716,6.51037717535479,6.54261577023377,9.82829546539238,16.4667848864992,4.22624246717254,9.59939500103664,7.78849626767228,7.92188906439752,9.64777121063621,5.15496660705154,10.3510835712389,12.4415452006595,10.7431271895067,11.537254819445,10.694084046201,14.9617204323059,8.99582408756334,8.92814664427068,4.83349480610109,7.82102885162541,9.54013051960256,9.38454765514915,13.609702720853,11.2856301981019,12.8623100488344,5.58794258339198,0,3.67157875831448,4.71767637753736,43.6084034463572,4.70269316756682,5.49017195148294,0,8.34255607258718,5.07269810395284,6.78685814530212,7.27811696747131,14.1111375322852,11.7361187430217,6.76315155195334,6.01682626794058,15.3295852214675,7.03362610109783,8.64292091788694,14.0843849058683,14.7856086217045,5.60561952332676,3.12431239445539,2.27355476151302,5.77083872764552,31.7245389230567,2.74128883428591,5.45832296228224,27.0841716313816,12.9040051915991,2.14280734351315,4.37168838884471,4.24875922965642,4.32558163567465,7.27359435333638,6.56833729067942,5.83059232087223,4.41803264349406,4.53832137583659,12.0557717701648,18.2419499102993,5.65150268523701,4.55635210756405,22.9823173917307,11.8710633666234,8.42117605752624,15.7658057002727,2.85906176706625,7.26862613970542,8.13689977576877,5.9111812582877,15.2325159298748,6.2164849248911,5.4629912670064,6.22133695632683,2.15113679410139,7.57324804675618,10.5664621901356,4.65725755210022,12.1426640328347,17.6817639828662,3.82215575590973,2.79638579494481,6.18346471776031,5.12055284925532,24.60229581314,11.3955715610434,6.95888658802919,8.25708688200537,25.7333409808316,5.76957247967968,7.37304562820925,8.80979439903888,4.39762066981717,10.5673990496671,5.32501690944818,8.30526329915038,0.940634592723046,5.63841140033983,7.3059729601504,2.1593931382644,4.75274240523338,5.4945244585842,8.83620996376648,7.33074560242858,7.60603078088211,6.29629282327052,4.99951028095841,7.76368717774522,2.96893056749923,5.84269110597214,5.96348068425903,6.02026249236095,7.88857810965923,3.87551494088214,23.5629372783804,3.7031878836078,15.2517957448368,8.78133694399695,12.1135437394661,10.7241461109817,4.47988845051152,4.43444753540029,11.32076010136,6.68043513163901,7.81106646046182,2.50707539292375,9.32077988084345,11.7904217268719,3.31667775783512,5.89568076412803,2.98527574661373,6.18967521805725,8.52573609835281,5.52464957233135,11.2131862580613,7.00118741059814,6.66986723562124,7.18465268059972,11.2936989358143,5.9269806652837,9.61077552261863,6.32054677437425,25.560626343846,9.07182439960581,9.653614114347,9.79094702961797,11.7320471201727,5.98983076496046,4.88275413978886,9.98635161278269,6.44076139491284,7.69364381527759 | |||
|short_description=p1@PANX1 | |||
}} |
Latest revision as of 03:12, 25 September 2015
Short description: | p1@PANX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PANX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000227638, ENST00000436171, NM_015368, uc001peq.2, uc001per.2_5end |
EntrezGene: | PANX1 |
HGNC: | 8599 |
UniProt: | Q96RD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.16e-12 | 48 |
phagocyte | 5.16e-12 | 48 |
granulocyte monocyte progenitor cell | 5.61e-12 | 67 |
classical monocyte | 2.35e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.35e-11 | 42 |
stem cell | 2.44e-11 | 441 |
somatic stem cell | 9.77e-11 | 433 |
macrophage dendritic cell progenitor | 6.94e-10 | 61 |
multi fate stem cell | 8.33e-10 | 427 |
myeloid lineage restricted progenitor cell | 1.33e-09 | 66 |
monopoietic cell | 2.19e-09 | 59 |
monocyte | 2.19e-09 | 59 |
monoblast | 2.19e-09 | 59 |
promonocyte | 2.19e-09 | 59 |
motile cell | 1.06e-07 | 386 |
myeloid leukocyte | 8.98e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 6.98e-11 | 167 |
bone marrow | 3.03e-10 | 76 |
bone element | 1.47e-09 | 82 |
skeletal system | 2.59e-09 | 100 |
skeletal element | 3.35e-09 | 90 |
mesoderm | 3.08e-08 | 315 |
mesoderm-derived structure | 3.08e-08 | 315 |
presumptive mesoderm | 3.08e-08 | 315 |
hematopoietic system | 1.58e-07 | 98 |
blood island | 1.58e-07 | 98 |