FFCP PHASE1:Hg19::chr12:6580094..6580114,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6843 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12642 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=38bp_to_ENST00000361716_5end | |||
|cluster_id=chr12:6580094..6580114,- | |||
|description=CAGE_peak_5_at_VAMP1_5end | |||
|id=chr12:6580094..6580114,- | |||
|ontology_enrichment_celltype=CL:0000838!9.71e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000346;1.61e-16;3!CL:1000428;1.61e-16;3!CL:0002559;2.71e-10;5!CL:0000236;1.16e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,1.17e-16,3;CL:1000428,1.17e-16,3;CL:0002559,2.25e-10,5;CL:0000236,4.06e-08,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.16e-14!82;UBERON:0005743!3.36e-13!86;UBERON:0001049!1.98e-12!57;UBERON:0005068!1.98e-12!57;UBERON:0006241!1.98e-12!57;UBERON:0007135!1.98e-12!57;UBERON:0000073!3.58e-12!94;UBERON:0001016!3.58e-12!94;UBERON:0000955!5.11e-12!69;UBERON:0006238!5.11e-12!69;UBERON:0002616!2.41e-11!59;UBERON:0003075!5.29e-10!86;UBERON:0007284!5.29e-10!86;UBERON:0007023!7.31e-10!115;UBERON:0004121!1.01e-09!169;UBERON:0000153!1.43e-09!129;UBERON:0007811!1.43e-09!129;UBERON:0000924!5.03e-09!173;UBERON:0006601!5.03e-09!173;UBERON:0002346!6.03e-09!90;UBERON:0002780!6.69e-09!41;UBERON:0001890!6.69e-09!41;UBERON:0006240!6.69e-09!41;UBERON:0001893!8.84e-09!34;UBERON:0003080!1.71e-08!42;UBERON:0000033!2.27e-08!123;UBERON:0002791!3.80e-08!33;UBERON:0000956!6.97e-08!25;UBERON:0000203!6.97e-08!25;UBERON:0002020!9.20e-08!34;UBERON:0003528!9.20e-08!34;UBERON:0001869!1.24e-07!32;UBERON:0001950!2.42e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.08e-24;2!UBERON:0005058;1.08e-24;2!UBERON:0009113;1.08e-24;2!UBERON:0000412;1.61e-16;3!UBERON:0001992;1.61e-16;3!UBERON:0004177;1.81e-10;5!UBERON:0005057;1.81e-10;5!UBERON:0002073;2.71e-10;5!UBERON:0001905;3.81e-07;2!UBERON:0002757;3.81e-07;2!UBERON:0010134;3.81e-07;2!UBERON:0005408;3.81e-07;2!UBERON:0001899;3.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,1.17e-16,3;UBERON:0001992,1.17e-16,3;UBERON:0002370,5.72e-13,4;UBERON:0005058,5.72e-13,4;UBERON:0009113,5.72e-13,4;UBERON:0003295,5.72e-13,4;UBERON:0005562,5.72e-13,4;UBERON:0002073,2.25e-10,5;UBERON:0005086,2.25e-10,5;UBERON:0003351,6.02e-09,6;UBERON:0004177,8.64e-08,7;UBERON:0005057,8.64e-08,7;UBERON:0001905,3.28e-07,2;UBERON:0002757,3.28e-07,2;UBERON:0010134,3.28e-07,2;UBERON:0005408,3.28e-07,2;UBERON:0001899,3.28e-07,2 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0.547497700291537,0.251085279189606,0.0764134057479513,0.164201178899891,0.314843125254717,0,0,0.154816123316076,0,0,0,0.46480320348181,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545812300115692,0.224723484445085,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0.605399502633369,0,0,0,0.425208599930087,0,0.44931452458598,0,0,0,0.59675003159727,0,0,1.09227722252426,0,0,1.60158394814405,0,1.32208974556972,0.954053754535364,0.569212969109448,0,0.764546456250458,0,0.560508562981536,0,0,0,0.411202997999018,0,0,0,0,0.222820913770347,0,0.443067789167242,0.270803863765016,0.25618263945135,0.260118695119756,0.328875809207352,0.276350017785848,0,0.14828656316206,0,2.09071047609954,0.226618685395132,0.383220493601921,0.68725489096526,0,0.637130828648193,0,0,0,0.127986611154418,0,0,0,0.604820229674197,0.534880391567015,0.289648807765598,0,0,0,0.361439152384566,0,0,0,0,0.189069634328136,0,0,0.261958150995425,0,0,0,0,0,0.476981248610684,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0,0.311211035399766,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0.204154171254893,0.122834317311768,0.103325781175765,1.18800285728205,0,0,0,0,0,0.277064115484183,0,0.30648779579902,0,0,0,0.427114777637135,0,0,0.206105058476878,0,0,0.168776332241266,0,0,0.276149695926898,0.161646056818812,0.355009592516614,0.201504196455281,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,1.28648187638577,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0.185176890317059,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0.871533458600294,0.199945982364114,0,0,0,0,1.14861935834114,0,0.144781306667579,0.205476322550383,0,0.224170287987055,0,0.215627574859517,0.513372145118994,0,0,0,0.335032530668698,0.637938751653163,2.99602809578873,0,0,0,0,0,0,0,0.157702415033935,0.234282829985426,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.27470839445503,0.082509499920588,0.574265537996172,0,0,0.096670718292122,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,0.569647187174163,0.476463550915578,0.822724546172388,0,0,0.79312517629427,0.106824071127473,0,0,0,0,0.213425530045242,0.318852545457645,0.199579371432817,0.383010740264733,0,0,0,0,0,0,0,0.1605880751037,0,0,0.687010689511529,0,0.447352215784832,0.166849141711909,0,0.556812347790485,0,0,0,0,0,0,0.485442086998054,0.111443384277478,0,0.23874448473769,0.296964680832639,0,0,0.281338832821026,0.222617410045812,0,1.05562704063997,0,0.276283915531148,0,0.20453736500431,0.123084805461069,0.311039587661807,0,0,0,0,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0.221158519862449,0.591095237907095,0.438770794307945,0.10893846351899,0,0.307801034015188,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0.167821586975843,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.404406797884062,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0.189559738885464,0.150323419414493,0.311064574191741,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0.0967563312890851,0.219267951258557,0,0.0969890164884194,0,0,0,0,0.316553979779393,0,0,0,0,0,0.229073192331831,0,0,0,0,0,0.209205692624666,0.203996435272644,0,0,0.273810757783986,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.335917362433631,0,0,0,0,0,0,0.169346664131569,0,0,0.160753148465019,0,0,0,0,0.364497339948148,0,0.236417121897595,0.209818352539992,0,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0.52893040697076,0,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0,0,0.306345576763462,0.327872630709804,0,0,0.366078794705889,0.625954653532499,0.573409195690071,0.332787154610557,0.310482014706917,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0.228840068396924,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0.39997479170986,0,0.172214979660816,0,0.184105950251841,0,0,0,0.107824811396682,0,0.327628914576042,0,0,0,0,0,0.394308725006267,0,0,0,0.385375350578757,0,0.478901577171454,0.41023272848151,0.252071696221718,0.829887029570615,0.322951291263702,0,0.0981477185010256,0.11796972334774,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0.49131575253029,0.147856086217045,0.540300676947157,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| |||
|short_description=p5@VAMP1 | |||
}} |
Latest revision as of 22:37, 19 September 2015
Short description: | p5@VAMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_VAMP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 38bp_to_ENST00000361716_5end |
EntrezGene: | VAMP1 |
HGNC: | 12642 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 1.17e-16 | 3 |
stem cell of epidermis | 1.17e-16 | 3 |
hair follicle cell | 2.25e-10 | 5 |
B cell | 4.06e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 1.17e-16 | 3 |
papillary layer of dermis | 1.17e-16 | 3 |
thymus | 5.72e-13 | 4 |
hemolymphoid system gland | 5.72e-13 | 4 |
thymic region | 5.72e-13 | 4 |
pharyngeal gland | 5.72e-13 | 4 |
thymus primordium | 5.72e-13 | 4 |
hair follicle | 2.25e-10 | 5 |
hair follicle placode | 2.25e-10 | 5 |
pharyngeal epithelium | 6.02e-09 | 6 |
hemopoietic organ | 8.64e-08 | 7 |
immune organ | 8.64e-08 | 7 |
pineal body | 3.28e-07 | 2 |
regional part of epithalamus | 3.28e-07 | 2 |
secretory circumventricular organ | 3.28e-07 | 2 |
circumventricular organ | 3.28e-07 | 2 |
epithalamus | 3.28e-07 | 2 |