FFCP PHASE1:Hg19::chr12:6961050..6961096,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83461 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14624 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=133bp_to_ENST00000538862_5end | |||
|cluster_id=chr12:6961050..6961096,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_CDCA3_5end | |||
|id=chr12:6961050..6961096,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000746;4.48e-08;7!CL:1000612;4.48e-08;7!CL:0000669;9.08e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000746,3.22e-08,7;CL:1000612,3.22e-08,7;CL:0000669,6.59e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.68e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:12603;3.50e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,4.34e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.66e-11!57;UBERON:0005068!4.66e-11!57;UBERON:0006241!4.66e-11!57;UBERON:0007135!4.66e-11!57;UBERON:0002616!3.07e-09!59;UBERON:0000955!9.28e-09!69;UBERON:0006238!9.28e-09!69;UBERON:0002346!7.10e-08!90;UBERON:0005743!1.21e-07!86;UBERON:0001017!2.64e-07!82;UBERON:0000073!2.81e-07!94;UBERON:0001016!2.81e-07!94;UBERON:0002780!2.83e-07!41;UBERON:0001890!2.83e-07!41;UBERON:0006240!2.83e-07!41;UBERON:0007023!3.36e-07!115;UBERON:0003075!4.46e-07!86;UBERON:0007284!4.46e-07!86;UBERON:0003080!8.30e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.45e-09;6!UBERON:0000074;4.48e-08;7!UBERON:0001229;4.48e-08;7!UBERON:0001000;3.50e-07;1!UBERON:0005352;3.50e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.45e-09,6;UBERON:0006215,1.45e-09,6;UBERON:0010532,3.22e-08,7;UBERON:0000074,3.22e-08,7;UBERON:0001229,3.22e-08,7;UBERON:0001230,3.22e-08,7;UBERON:0003220,3.22e-08,7;UBERON:0005749,3.22e-08,7;UBERON:0004199,3.22e-08,7;UBERON:0004209,3.22e-08,7;UBERON:0004198,3.22e-08,7;UBERON:0001000,3.02e-07,1;UBERON:0005352,3.02e-07,1;UBERON:0005103,3.04e-07,8;UBERON:0000083,3.04e-07,8;UBERON:0009201,3.04e-07,8;UBERON:0006553,3.04e-07,8;UBERON:0003074,3.04e-07,8;UBERON:0003060,3.04e-07,8 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.422863212287913,1.0007329835313,0.446961094427288,0.872338524100369,0,0.631719873426831,0.261185628199839,0,0,0.873765488520689,0,0.37129905888014,0,0,0,0,0,0.492484232307152,1.02000345622126,0,0.286235987131057,0.273748850145768,0.502170558379211,0.916960868975415,0.821005894499457,0.472264687882075,0,0,0,0,0,0.369754010166788,0.154934401160603,0.568676929949686,0.293600439334847,0,0,0,0.447830948479849,0.32389366601898,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22465726229299,0,0,0,0,0,0,0.546138611262131,0,1.70692089026603,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0.205601498999509,0.167186495390678,0.32592226663359,0,0,0.334231370655521,0,0,0,0.128091319725675,0,0.164437904603676,0.276350017785848,0.869409257205157,0.14828656316206,0,0,0.226618685395132,0,0,0,0,0.651083453856419,0.950452044448374,0.451725357233318,0.511946444617674,0,0,0,0.403213486449465,0.267440195783507,0,0,0,0.383587685530591,0.722878304769133,0,0,0,0,0.283604451492204,0.443458794925128,0,5.95954793514592,1.09288586487763,0,0.649094787309367,0,0,0.953962497221368,0,0.74291500265913,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0,0,0.516833518338658,0.71153252537342,0,0.402829317109147,0,0.488124115096339,0,0,0.17859945656816,0,0.563057402416611,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0.560677600142307,1.06748995729705,0,0.622422070799533,0,0,0.302714855289863,1.15235184896,0.234321431833797,0,0,0.149448680551801,0.469737994575059,0.161872944368132,0.561803226808994,0.204154171254893,0.122834317311768,0.206651562351531,0,0,0,0,0,0.250237039743928,0.277064115484183,0,0,0,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0,0.206105058476878,0,0.18611685633159,0.506328996723799,0.292311015483596,0.252433774244115,0,0.161646056818812,0,0.503760491138201,0,0.386521706326594,0.272746120590835,0,0.121973706129595,0.132529768321485,0.232387885739037,0,0.504641701751257,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0.482022059766964,0.110293972732394,0,0,0.269662616320329,0,0,0,0,0.4115740113314,0,0,0,0,1.32438929824395,0,0.171567810298526,0.439001141634502,1.1240175325762,0,0.0925884451585296,0,0,0,0.231860809950154,0.117408694235822,0.577465791044295,0,0,0,0.858486162094873,0.492434012174795,0,0.148631162288728,0,0.16798212819886,0,0.179117045405697,0.290633938513962,0,0,0.176096868026452,0,0.288239906833923,0.12624243342638,0.253991577168676,0.763976851116555,0,0,0,0.300343057843917,0,0.336393253036082,0.43596006883328,0.2933531432838,0.387815147273333,0,0,0,1.04007436911366,0.257207374262142,0,0.532844358032199,0.285955987316295,0,0,0,0,0,0.904318131178758,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0.579125226670317,0.205476322550383,0.358121926479791,0.560425719967636,0.394061520403854,0,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0,0.271265023699736,0.207970861530807,0,0.157702415033935,0.234282829985426,0,2.27407504055985,0,0,0,0.173767228936166,0.979005787313703,1.37257369524342,0,0,0,0.303127571446259,0,0.30239029332968,0.248107807818777,0.306923946576125,0.280660094433074,0.512556597022804,0,0.321707842287215,0,0,0,0.0821271560138091,0,0.348631135379878,0.120859449591622,0.200506470303285,0.0920809889358963,0.114814448164607,0,0.262248829918848,0.451199612907412,0.15403067420883,0,2.92278449306521,0.422206515571503,1.13733384070897,0.510281115829547,0.215915916102139,1.54227252690289,0.270946437543853,1.50506932156456,0,0,0.223874754722178,0.657779629937804,0.522870902049801,0,0.656029291399411,0.325378394664303,0.412164046590889,0.0915694648183434,0.247528499761764,0,0,0,0.48335359146061,0.308097234229289,0.15350367472613,0.137836572484531,0.322260734604821,0.145016693914229,0.170453254832202,0.178064071293475,0,0,0.255225424989168,0.10115778085555,0.929691098594572,0,0,0.308033580176089,0,0.869932992075073,0.18532421910392,0.286249773483982,0,0,0,0.511795582622668,0,0.636406495851874,0,0,0.274537029736055,0.471249609382746,0.202182481573316,0,0.421258456238981,0.48763373908959,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0.6196469961995,0.281695602532241,0,0.196498082026242,0,0.354761064070598,0.211107635297664,0.329294892959902,0,0.349934720244983,0.288666338176536,0,0,0.376575203107117,0.43050537267123,0,0,0,0,0,0.569647187174163,0.476463550915578,0.411362273086194,0,0,0,0.106824071127473,0,0.245040215981032,1.11481905075431,0.28853842595289,0.711418433484141,0.797131363644112,0.199579371432817,0.191505370132367,0,0,1.12318871245384,0,0.313359791546046,0,0.338583555603207,0.642352300414798,0.201799707191048,0.425846237690326,0.343505344755765,0,0.223676107892416,0,0.19538809540204,0.556812347790485,0,0,0.33307196799782,0,0.18714054040822,0.146508179271894,0.849523652246594,0.66866030566487,0.568272293612826,0.23874448473769,0,0,0.994147647766298,0.422008249231538,0.222617410045812,0.329607748453519,0.422250816255987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| |||
|short_description=p2@CDCA3 | |||
}} |
Latest revision as of 05:03, 20 September 2015
Short description: | p2@CDCA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDCA3_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 133bp_to_ENST00000538862_5end |
EntrezGene: | CDCA3 |
HGNC: | 14624 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular cell | 3.22e-08 | 7 |
kidney corpuscule cell | 3.22e-08 | 7 |
pericyte cell | 6.59e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.45e-09 | 6 |
rhombic lip | 1.45e-09 | 6 |
primitive nephron | 3.22e-08 | 7 |
renal glomerulus | 3.22e-08 | 7 |
renal corpuscle | 3.22e-08 | 7 |
glomerular capsule | 3.22e-08 | 7 |
metanephric mesenchyme | 3.22e-08 | 7 |
glomerular tuft | 3.22e-08 | 7 |
S-shaped body | 3.22e-08 | 7 |
renal vesicle | 3.22e-08 | 7 |
comma-shaped body | 3.22e-08 | 7 |
vas deferens | 3.02e-07 | 1 |
spermatic cord | 3.02e-07 | 1 |
mesonephric epithelium | 3.04e-07 | 8 |
mesonephric tubule | 3.04e-07 | 8 |
nephric duct | 3.04e-07 | 8 |
renal duct | 3.04e-07 | 8 |
mesonephric duct | 3.04e-07 | 8 |
pronephric duct | 3.04e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 4.34e-07 | 1 |