FFCP PHASE1:Hg19::chr8:143823816..143823832,-: Difference between revisions
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|id=chr8:143823816..143823832,-
|short_description=p1@SLURP1
|description=CAGE_peak_1_at_SLURP1_5end
|association_with_transcript=0bp_to_ENST00000246515,NM_020427,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57152 | |EntrezGene=57152 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18746 | |HGNC=18746 | ||
|TSSclassifier=strong | |||
|UniProt=P55000 | |UniProt=P55000 | ||
|association_with_transcript=0bp_to_ENST00000246515,NM_020427,uc003ywy.2_5end | |||
|cluster_id=chr8:143823816..143823832,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_1_at_SLURP1_5end | |||
|id=chr8:143823816..143823832,- | |||
|ontology_enrichment_celltype=CL:0002076!1.32e-18!43;CL:0002251!1.73e-12!21;CL:0000223!3.85e-12!59;CL:0002368!1.86e-11!13;CL:0000622!2.86e-09!5;CL:0002623!3.21e-09!3;CL:0002328!1.12e-08!3;CL:0002621!1.66e-08!3;CL:0000154!1.04e-07!6;CL:0000066!1.22e-07!254;CL:0002159!6.53e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002328;1.79e-14;3!CL:0000575;6.51e-11;2!CL:0001014;9.40e-11;2!CL:0001016;9.40e-11;2!CL:0000622;1.52e-09;5!CL:0002368;1.16e-08;13!CL:0002159;2.53e-08;14!CL:0002076;2.88e-08;42!CL:0000154;5.06e-08;6!CL:0002623;6.97e-08;3!CL:0002621;5.14e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002328,2.16e-14,3;CL:0000575,7.01e-11,2;CL:0001014,9.88e-11,2;CL:0001016,9.88e-11,2;CL:0000622,1.26e-09,5;CL:0002076,2.33e-09,42;CL:0002368,1.14e-08,13;CL:0002159,2.19e-08,14;CL:0000154,4.33e-08,6;CL:0002623,6.98e-08,3;CL:0002621,4.27e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5093!5.32e-11!4;DOID:1612!5.32e-11!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.37e-11;4!DOID:1612;1.37e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.42e-11,4;DOID:1612,1.42e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0000166!1.60e-21!21;UBERON:0001004!4.47e-19!72;UBERON:0000165!3.09e-15!28;UBERON:0000930!3.09e-15!28;UBERON:0000161!2.54e-13!35;UBERON:0003408!3.75e-12!10;UBERON:0001044!3.31e-11!6;UBERON:0003293!3.31e-11!6;UBERON:0003294!3.31e-11!6;UBERON:0010047!3.31e-11!6;UBERON:0000167!3.31e-11!6;UBERON:0006562!6.67e-11!11;UBERON:0000078!1.08e-10!18;UBERON:0001444!3.08e-10!48;UBERON:0004119!3.29e-10!169;UBERON:0000925!3.29e-10!169;UBERON:0006595!3.29e-10!169;UBERON:0000065!5.55e-10!53;UBERON:0001042!3.58e-09!10;UBERON:0009145!3.58e-09!10;UBERON:0001723!7.97e-09!3;UBERON:0001033!7.97e-09!3;UBERON:0010056!7.97e-09!3;UBERON:0003102!9.59e-09!95;UBERON:0004815!1.12e-08!3;UBERON:0002031!1.12e-08!3;UBERON:0001949!1.66e-08!3;UBERON:0000974!1.92e-08!10;UBERON:0004807!3.03e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.79e-14;3!UBERON:0002031;1.79e-14;3!UBERON:0002185;6.93e-09;5!UBERON:0000165;8.14e-08;28!UBERON:0001723;8.51e-08;3!UBERON:0001033;8.51e-08;3!UBERON:0001043;1.72e-07;3!UBERON:0001949;5.14e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,2.16e-14,3;UBERON:0002031,2.16e-14,3;UBERON:0000166,2.97e-10,22;UBERON:0001004,1.03e-09,74;UBERON:0000153,6.08e-09,62;UBERON:0007811,6.08e-09,62;UBERON:0002185,7.74e-09,5;UBERON:0001042,3.97e-08,10;UBERON:0009145,3.97e-08,10;UBERON:0001723,8.24e-08,3;UBERON:0001033,8.24e-08,3;UBERON:0010056,8.24e-08,3;UBERON:0003102,8.48e-08,99;UBERON:0000165,1.52e-07,29;UBERON:0000930,1.52e-07,29;UBERON:0001043,1.81e-07,3;UBERON:0009143,1.81e-07,3;UBERON:0006562,2.16e-07,11;UBERON:0001949,4.27e-07,3;UBERON:0000065,4.96e-07,54;UBERON:0000033,5.77e-07,56 | |||
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| ||
|short_description=p1@SLURP1 | |||
}} | }} |
Latest revision as of 21:20, 16 September 2015
Short description: | p1@SLURP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLURP1_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | 0bp_to_ENST00000246515, NM_020427, uc003ywy.2_5end |
EntrezGene: | SLURP1 |
HGNC: | 18746 |
UniProt: | P55000 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial epithelial cell | 2.16e-14 | 3 |
corneal epithelial cell | 7.01e-11 | 2 |
CD1a-positive Langerhans cell | 9.88e-11 | 2 |
immature CD1a-positive Langerhans cell | 9.88e-11 | 2 |
acinar cell | 1.26e-09 | 5 |
endo-epithelial cell | 2.33e-09 | 42 |
respiratory epithelial cell | 1.14e-08 | 13 |
general ecto-epithelial cell | 2.19e-08 | 14 |
protein secreting cell | 4.33e-08 | 6 |
acinar cell of salivary gland | 6.98e-08 | 3 |
gingival epithelial cell | 4.27e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 2.16e-14 | 3 |
epithelium of bronchus | 2.16e-14 | 3 |
oral opening | 2.97e-10 | 22 |
respiratory system | 1.03e-09 | 74 |
anterior region of body | 6.08e-09 | 62 |
craniocervical region | 6.08e-09 | 62 |
bronchus | 7.74e-09 | 5 |
chordate pharynx | 3.97e-08 | 10 |
pharyngeal region of foregut | 3.97e-08 | 10 |
tongue | 8.24e-08 | 3 |
gustatory system | 8.24e-08 | 3 |
future tongue | 8.24e-08 | 3 |
surface structure | 8.48e-08 | 99 |
mouth | 1.52e-07 | 29 |
stomodeum | 1.52e-07 | 29 |
esophagus | 1.81e-07 | 3 |
esophageal region | 1.81e-07 | 3 |
pharynx | 2.16e-07 | 11 |
gingival epithelium | 4.27e-07 | 3 |
respiratory tract | 4.96e-07 | 54 |
head | 5.77e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.42e-11 | 4 |
breast cancer | 1.42e-11 | 4 |