FFCP PHASE1:Hg19::chr16:21244912..21244929,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:21244912..21244929,- | |||
|coexpression_cluster_id=C783 | |||
|description=CAGE_peak_at_chr16:21244912..21244929,- | |||
|id=chr16:21244912..21244929,- | |||
|ontology_enrichment_celltype=CL:0000181!2.53e-17!12;CL:0000417!2.53e-17!12;CL:0000668!2.53e-17!12;CL:0000414!2.53e-17!12;CL:0000412!2.53e-17!12;CL:0000182!2.53e-17!12;CL:0000223!4.41e-12!59;CL:0002563!8.10e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002535;3.56e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,3.56e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:299!5.82e-08!25;DOID:305!7.54e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.24e-19!19;UBERON:0006925!5.24e-19!19;UBERON:0008836!5.24e-19!19;UBERON:0008835!2.96e-16!22;UBERON:0003894!2.96e-16!22;UBERON:0000160!7.73e-16!27;UBERON:0009854!1.70e-15!23;UBERON:0005409!7.20e-15!35;UBERON:0004921!3.62e-14!129;UBERON:0004185!3.62e-14!129;UBERON:0007499!3.67e-14!25;UBERON:0009497!3.67e-14!25;UBERON:0000015!3.67e-14!25;UBERON:0002423!3.67e-14!25;UBERON:0006235!3.67e-14!25;UBERON:0004161!3.67e-14!25;UBERON:0005057!1.43e-13!26;UBERON:0009856!1.43e-13!26;UBERON:0003929!2.83e-11!54;UBERON:0002365!3.43e-11!31;UBERON:0002330!3.43e-11!31;UBERON:0001007!4.16e-11!155;UBERON:0001555!4.16e-11!155;UBERON:0007026!4.16e-11!155;UBERON:0004119!7.52e-10!169;UBERON:0000925!7.52e-10!169;UBERON:0006595!7.52e-10!169;UBERON:0002368!8.91e-10!35;UBERON:0000949!2.98e-09!45;UBERON:0005172!5.75e-09!55;UBERON:0005173!5.75e-09!55;UBERON:0000059!7.14e-09!11;UBERON:0005911!3.80e-08!82;UBERON:0002417!6.46e-08!61;UBERON:0000916!6.46e-08!61;UBERON:0001242!8.10e-07!4;UBERON:0001262!8.10e-07!4;UBERON:0004786!8.10e-07!4;UBERON:0004808!8.10e-07!4;UBERON:0001277!8.10e-07!4;UBERON:0001052!9.11e-07!4;UBERON:0002530!9.88e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;2.82e-14;22!UBERON:0000160;5.28e-12;17!UBERON:0002107;1.35e-11;19!UBERON:0006925;1.35e-11;19!UBERON:0002108;1.62e-11;4!UBERON:0002423;7.22e-09;25!UBERON:0004921;3.49e-08;33!UBERON:0006955;3.56e-08;2!UBERON:0004801;3.56e-08;2!UBERON:0002365;3.86e-07;31!UBERON:0002330;3.86e-07;31!UBERON:0001007;7.97e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.17e-12,25;UBERON:0000160,5.13e-12,17;UBERON:0002107,1.41e-11,19;UBERON:0006925,1.41e-11,19;UBERON:0008836,1.41e-11,19;UBERON:0002108,1.50e-11,4;UBERON:0008835,4.95e-10,22;UBERON:0003894,4.95e-10,22;UBERON:0004921,5.17e-10,118;UBERON:0009854,1.32e-09,23;UBERON:0007499,7.44e-09,25;UBERON:0009497,7.44e-09,25;UBERON:0000015,7.44e-09,25;UBERON:0002423,7.44e-09,25;UBERON:0006235,7.44e-09,25;UBERON:0004161,7.44e-09,25;UBERON:0009856,1.60e-08,26;UBERON:0006955,3.56e-08,2;UBERON:0004801,3.56e-08,2;UBERON:0001007,6.11e-08,145;UBERON:0001555,6.11e-08,145;UBERON:0007026,6.11e-08,145;UBERON:0002365,3.53e-07,31;UBERON:0002330,3.53e-07,31;UBERON:0004119,4.37e-07,160;UBERON:0000925,4.37e-07,160;UBERON:0006595,4.37e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.87285243752816,0,3.54473944008842,0,1.35287282397425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98818933778395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30998378285754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0927718970052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0.995261931078505,0,2.4441205797345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72908500584927,0,2.23073497220554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315132729228895,0.494495150286999,0.471824806979294,0.0984274815147488,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22414914091781,1.32506888912221,0,0,1.88195521672762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487671699929078,0,0,0,0,0,0,0,0,0,0,0.617393264863557,1.5299169235277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449126010532934,0,0,0,0,0,0 | |||
|short_description=p@chr16:21244912..21244929,- | |||
}} |
Latest revision as of 07:04, 25 July 2015
Short description: | p@chr16:21244912..21244929, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:21244912..21244929, - |
Coexpression cluster: | C783_argyrophil_Hepatocyte_liver_gastrointestinal_hepatocellular_adenocarcinoma_Intestinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 3.56e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.17e-12 | 25 |
intestine | 5.13e-12 | 17 |
liver | 1.41e-11 | 19 |
digestive gland | 1.41e-11 | 19 |
liver bud | 1.41e-11 | 19 |
small intestine | 1.50e-11 | 4 |
hepatic diverticulum | 4.95e-10 | 22 |
liver primordium | 4.95e-10 | 22 |
subdivision of digestive tract | 5.17e-10 | 118 |
digestive tract diverticulum | 1.32e-09 | 23 |
epithelial sac | 7.44e-09 | 25 |
epithelium of foregut-midgut junction | 7.44e-09 | 25 |
anatomical boundary | 7.44e-09 | 25 |
hepatobiliary system | 7.44e-09 | 25 |
foregut-midgut junction | 7.44e-09 | 25 |
septum transversum | 7.44e-09 | 25 |
sac | 1.60e-08 | 26 |
uterine epithelium | 3.56e-08 | 2 |
cervix epithelium | 3.56e-08 | 2 |
digestive system | 6.11e-08 | 145 |
digestive tract | 6.11e-08 | 145 |
primitive gut | 6.11e-08 | 145 |
exocrine gland | 3.53e-07 | 31 |
exocrine system | 3.53e-07 | 31 |
endoderm-derived structure | 4.37e-07 | 160 |
endoderm | 4.37e-07 | 160 |
presumptive endoderm | 4.37e-07 | 160 |