FFCP PHASE1:Hg19::chr16:50426225..50426231,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:50426225..50426231,- | |||
|coexpression_cluster_id=C42 | |||
|description=CAGE_peak_at_chr16:50426225..50426231,- | |||
|id=chr16:50426225..50426231,- | |||
|ontology_enrichment_celltype=CL:0002563!8.02e-23!4;CL:0002251!3.47e-17!21;CL:0002253!2.59e-12!2;CL:0000082!4.52e-11!19;CL:0002178!9.66e-09!3;CL:0002076!1.34e-08!43 | |||
|ontology_enrichment_celltype_v019=CL:0002178;4.09e-23;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,4.09e-23,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5409!5.14e-23!4;DOID:3905!1.46e-22!9;DOID:3119!6.37e-15!14;DOID:1324!7.68e-14!15;DOID:1325!1.31e-13!7;DOID:3904!1.31e-13!7;DOID:0050615!5.08e-13!16;DOID:3493!1.85e-12!2;DOID:305!4.47e-10!106;DOID:0050687!1.15e-09!143;DOID:4556!1.51e-08!3 | |||
|ontology_enrichment_disease_v019=DOID:3493;7.05e-34;2!DOID:3119;7.13e-20;14!DOID:5409;7.35e-18;4!DOID:1325;8.16e-11;7!DOID:3904;8.16e-11;7!DOID:3905;1.04e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,7.05e-34,2;DOID:3119,7.13e-20,14;DOID:5409,7.35e-18,4;DOID:1325,8.16e-11,7;DOID:3904,8.16e-11,7;DOID:3905,1.04e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0001242!8.02e-23!4;UBERON:0001262!8.02e-23!4;UBERON:0004786!8.02e-23!4;UBERON:0004808!8.02e-23!4;UBERON:0001277!8.02e-23!4;UBERON:0003350!1.77e-18!5;UBERON:0000344!3.84e-17!12;UBERON:0004802!4.52e-11!19;UBERON:0000115!4.52e-11!19;UBERON:0000485!1.02e-10!9;UBERON:0002048!1.19e-09!22;UBERON:0000117!1.19e-09!22;UBERON:0000171!1.19e-09!22;UBERON:0000170!1.19e-09!22;UBERON:0005597!1.19e-09!22;UBERON:0000118!1.19e-09!22;UBERON:0001723!1.04e-08!3;UBERON:0001033!1.04e-08!3;UBERON:0010056!1.04e-08!3;UBERON:0000060!2.85e-08!12;UBERON:0004921!3.75e-08!129;UBERON:0004185!3.75e-08!129;UBERON:0000072!4.80e-08!46;UBERON:0004807!1.04e-07!28;UBERON:0000065!5.04e-07!53;UBERON:0005911!7.61e-07!82;UBERON:0003343!7.70e-07!4;UBERON:0004785!7.70e-07!4;UBERON:0001052!8.61e-07!4;UBERON:0001007!9.45e-07!155;UBERON:0001555!9.45e-07!155;UBERON:0007026!9.45e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;1.83e-14;5!UBERON:0010039;1.83e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,1.47e-09,8;UBERON:0010039,1.47e-09,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.693153996902029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65005630761156,0,0,0,0,0,0,14.3244558116185,0,1382.23415199279,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:50426225..50426231,- | |||
}} |
Latest revision as of 20:33, 16 September 2015
Short description: | p@chr16:50426225..50426231, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:50426225..50426231, - |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 4.09e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
stomach | 1.47e-09 | 8 |
food storage organ | 1.47e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 7.05e-34 | 2 |
gastrointestinal system cancer | 7.13e-20 | 14 |
lung small cell carcinoma | 7.35e-18 | 4 |
bronchus cancer | 8.16e-11 | 7 |
bronchogenic carcinoma | 8.16e-11 | 7 |
lung carcinoma | 1.04e-08 | 9 |