FFCP PHASE1:Hg19::chr8:38831732..38831758,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:38831732..38831758,+
|short_description=p1@HTRA4
|description=CAGE_peak_1_at_HTRA4_5end
|association_with_transcript=49bp_to_ENST00000302495_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=203100 | |EntrezGene=203100 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26909 | |HGNC=26909 | ||
|TSSclassifier=strong | |||
|UniProt=P83105 | |UniProt=P83105 | ||
|association_with_transcript=49bp_to_ENST00000302495_5end | |||
|cluster_id=chr8:38831732..38831758,+ | |||
|coexpression_cluster_id=C4753 | |||
|description=CAGE_peak_1_at_HTRA4_5end | |||
|id=chr8:38831732..38831758,+ | |||
|ontology_enrichment_celltype=CL:0002194!1.01e-23!63;CL:0000576!1.01e-23!63;CL:0000040!1.01e-23!63;CL:0000559!1.01e-23!63;CL:0002009!8.74e-23!65;CL:0000839!1.11e-20!70;CL:0000557!2.70e-20!71;CL:0000766!1.60e-18!76;CL:0002057!1.85e-13!42;CL:0000860!2.68e-12!45;CL:0000235!1.17e-10!10;CL:0002541!1.48e-10!3;CL:0000763!1.74e-10!112;CL:0000049!1.74e-10!112;CL:0002087!1.67e-09!119;CL:0002619!4.76e-09!3;CL:0002031!7.13e-09!124;CL:0000738!3.52e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000235;6.64e-33;6!CL:0002541;1.13e-25;3!CL:0000473;1.52e-15;39!CL:0000234;1.52e-15;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,5.26e-33,6;CL:0002541,1.13e-25,3;CL:0000473,8.36e-15,48;CL:0000234,8.36e-15,48;CL:0002194,1.57e-11,59;CL:0000576,1.57e-11,59;CL:0000040,1.57e-11,59;CL:0000559,1.57e-11,59;CL:0002009,4.14e-11,61;CL:0000839,3.65e-10,66;CL:0000557,5.43e-10,67;CL:0000766,3.36e-09,72 | |||
|ontology_enrichment_development_v019=UBERON:0003124;9.43e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;3.98e-09;1!DOID:10165;3.98e-09;1!DOID:1798;3.98e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,5.28e-09,1;DOID:10165,5.28e-09,1;DOID:1798,5.28e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.90e-17!80;UBERON:0001474!1.34e-15!86;UBERON:0004765!1.81e-13!101;UBERON:0001434!1.81e-13!101;UBERON:0002390!3.91e-12!102;UBERON:0003061!3.91e-12!102;UBERON:0002193!1.57e-11!112;UBERON:0002405!4.65e-11!115;UBERON:0000476!1.48e-10!3;UBERON:0000920!1.48e-10!3;UBERON:0003124!1.12e-07!7;UBERON:0005631!1.83e-07!14;UBERON:0000158!1.83e-07!14;UBERON:0002204!5.75e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.13e-25;3!UBERON:0000920;1.13e-25;3!UBERON:0005631;4.51e-08;10!UBERON:0000158;4.51e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.13e-25,3;UBERON:0003124,2.40e-19,7;UBERON:0005631,9.29e-10,14;UBERON:0000158,9.29e-10,14;UBERON:0002371,1.22e-08,76;UBERON:0001474,6.63e-08,82;UBERON:0004765,4.49e-07,90;UBERON:0002405,8.46e-07,93 | |||
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| ||
|short_description=p1@HTRA4 | |||
}} | }} |
Latest revision as of 04:50, 18 September 2015
Short description: | p1@HTRA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HTRA4_5end |
Coexpression cluster: | C4753_choriocarcinoma_chorionic_placenta_mesothelioma_Macrophage_Retinal_CD14 |
Association with transcript: | 49bp_to_ENST00000302495_5end |
EntrezGene: | HTRA4 |
HGNC: | 26909 |
UniProt: | P83105 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 5.26e-33 | 6 |
chorionic membrane mesenchymal stem cell | 1.13e-25 | 3 |
defensive cell | 8.36e-15 | 48 |
phagocyte | 8.36e-15 | 48 |
monopoietic cell | 1.57e-11 | 59 |
monocyte | 1.57e-11 | 59 |
monoblast | 1.57e-11 | 59 |
promonocyte | 1.57e-11 | 59 |
macrophage dendritic cell progenitor | 4.14e-11 | 61 |
myeloid lineage restricted progenitor cell | 3.65e-10 | 66 |
granulocyte monocyte progenitor cell | 5.43e-10 | 67 |
myeloid leukocyte | 3.36e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.13e-25 | 3 |
chorion | 2.40e-19 | 7 |
extraembryonic membrane | 9.29e-10 | 14 |
membranous layer | 9.29e-10 | 14 |
bone marrow | 1.22e-08 | 76 |
bone element | 6.63e-08 | 82 |
skeletal element | 4.49e-07 | 90 |
immune system | 8.46e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 5.28e-09 | 1 |
endocrine pancreas cancer | 5.28e-09 | 1 |
pancreatic endocrine carcinoma | 5.28e-09 | 1 |