FFCP PHASE1:Hg19::chr17:47486527..47486535,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:47486527..47486535,- | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_at_chr17:47486527..47486535,- | |||
|id=chr17:47486527..47486535,- | |||
|ontology_enrichment_celltype=CL:0000784!3.13e-18!3;CL:0000451!7.20e-13!10;CL:0001014!3.96e-12!2;CL:0001016!3.96e-12!2;CL:0000840!4.74e-09!5;CL:0001029!4.74e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0000784;4.73e-47;3!CL:0000451;1.07e-22;10!CL:0000840;3.75e-11;5!CL:0001014;8.09e-09;2!CL:0000771;8.09e-09;2!CL:0001016;8.09e-09;2!CL:0000990;9.85e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,4.73e-47,3;CL:0000451,1.14e-22,10;CL:0000840,3.95e-11,5;CL:0001029,3.95e-11,5;CL:0000771,8.09e-09,2;CL:0001014,8.74e-09,2;CL:0001016,8.74e-09,2;CL:0000990,1.02e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.04e-16;1!UBERON:0008801;1.41e-16;1!UBERON:0006965;6.67e-09;2!UBERON:0008814;8.09e-09;2!UBERON:0010056;8.09e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001829!1.53e-12!2;UBERON:0003127!3.96e-12!2;UBERON:0000078!9.18e-11!18;UBERON:0001044!2.81e-09!6;UBERON:0003293!2.81e-09!6;UBERON:0003294!2.81e-09!6;UBERON:0010047!2.81e-09!6;UBERON:0000167!2.81e-09!6;UBERON:0000166!3.87e-09!21;UBERON:0007023!9.40e-09!115;UBERON:0001723!1.58e-08!3;UBERON:0001033!1.58e-08!3;UBERON:0010056!1.58e-08!3;UBERON:0001736!3.95e-07!1;UBERON:0006298!3.95e-07!1;UBERON:0001831!4.43e-07!1;UBERON:0001567!4.43e-07!1;UBERON:0008801!4.43e-07!1;UBERON:0000998!6.60e-07!1;UBERON:0006868!6.60e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.87e-31;2!UBERON:0001044;9.87e-24;6!UBERON:0003293;9.87e-24;6!UBERON:0003294;9.87e-24;6!UBERON:0010047;9.87e-24;6!UBERON:0003408;9.87e-24;6!UBERON:0000167;9.87e-24;6!UBERON:0001723;5.19e-21;3!UBERON:0001033;5.19e-21;3!UBERON:0001736;1.04e-16;1!UBERON:0001831;1.41e-16;1!UBERON:0001567;1.41e-16;1!UBERON:0000165;1.13e-13;28!UBERON:0001041;1.52e-10;14!UBERON:0003127;4.70e-09;2!UBERON:0000341;5.49e-09;2!UBERON:0004089;5.94e-09;2!UBERON:0000161;6.47e-08;19!UBERON:0000166;6.47e-08;19!UBERON:0007811;5.74e-07;52!UBERON:0000153;7.10e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.87e-31,2;UBERON:0001044,9.87e-24,6;UBERON:0003293,9.87e-24,6;UBERON:0003294,9.87e-24,6;UBERON:0010047,9.87e-24,6;UBERON:0000167,9.87e-24,6;UBERON:0001723,4.94e-21,3;UBERON:0001033,4.94e-21,3;UBERON:0010056,4.94e-21,3;UBERON:0000166,2.18e-17,22;UBERON:0001736,1.04e-16,1;UBERON:0006298,1.04e-16,1;UBERON:0001831,1.41e-16,1;UBERON:0001567,1.41e-16,1;UBERON:0008801,1.41e-16,1;UBERON:0003408,1.61e-14,10;UBERON:0000165,3.30e-13,29;UBERON:0000930,3.30e-13,29;UBERON:0000161,1.21e-10,36;UBERON:0003127,4.70e-09,2;UBERON:0000341,5.49e-09,2;UBERON:0004089,5.94e-09,2;UBERON:0000153,1.20e-08,62;UBERON:0007811,1.20e-08,62;UBERON:0001444,8.16e-08,49;UBERON:0001004,3.31e-07,74;UBERON:0001042,5.76e-07,10;UBERON:0009145,5.76e-07,10;UBERON:0000033,7.87e-07,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.5184968006716,27.4557557174461,21.1730775757852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0.822724546172388,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98871982376605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83780436800028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,61.5225123112997,0,0,0.846774100381858,0,0,0,0,0,0.731507549893617,0,0,0,0,0,0,0,0,0,0.905777061400041,0.154348316215889,0,0,0,0.235676547101626,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,17.8904420527771,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.05144565611864,0,0,0,0,0,0,1.52401723527873,2.73786640868225,0.202056159043763,18.4326067859178,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:47486527..47486535,- | |||
}} |
Latest revision as of 18:21, 25 July 2015
Short description: | p@chr17:47486527..47486535, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:47486527..47486535, - |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 4.73e-47 | 3 |
dendritic cell | 1.14e-22 | 10 |
immature conventional dendritic cell | 3.95e-11 | 5 |
common dendritic progenitor | 3.95e-11 | 5 |
eosinophil | 8.09e-09 | 2 |
CD1a-positive Langerhans cell | 8.74e-09 | 2 |
immature CD1a-positive Langerhans cell | 8.74e-09 | 2 |
conventional dendritic cell | 1.02e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.87e-31 | 2 |
saliva-secreting gland | 9.87e-24 | 6 |
gland of oral region | 9.87e-24 | 6 |
gland of foregut | 9.87e-24 | 6 |
oral gland | 9.87e-24 | 6 |
oral cavity | 9.87e-24 | 6 |
tongue | 4.94e-21 | 3 |
gustatory system | 4.94e-21 | 3 |
future tongue | 4.94e-21 | 3 |
oral opening | 2.18e-17 | 22 |
submandibular gland | 1.04e-16 | 1 |
submandibular gland primordium | 1.04e-16 | 1 |
parotid gland | 1.41e-16 | 1 |
cheek | 1.41e-16 | 1 |
parotid gland primordium | 1.41e-16 | 1 |
gland of gut | 1.61e-14 | 10 |
mouth | 3.30e-13 | 29 |
stomodeum | 3.30e-13 | 29 |
orifice | 1.21e-10 | 36 |
open tracheal system trachea | 4.70e-09 | 2 |
throat | 5.49e-09 | 2 |
midface | 5.94e-09 | 2 |
anterior region of body | 1.20e-08 | 62 |
craniocervical region | 1.20e-08 | 62 |
subdivision of head | 8.16e-08 | 49 |
respiratory system | 3.31e-07 | 74 |
chordate pharynx | 5.76e-07 | 10 |
pharyngeal region of foregut | 5.76e-07 | 10 |
head | 7.87e-07 | 56 |