FFCP PHASE1:Hg19::chr8:48540648..48540655,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:48540648..48540655,+
|short_description=p@chr8:48540648..48540655,+
|description=CAGE_peak_at_chr8:48540648..48540655,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:48540648..48540655,+ | |||
|coexpression_cluster_id=C1712 | |||
|description=CAGE_peak_at_chr8:48540648..48540655,+ | |||
|id=chr8:48540648..48540655,+ | |||
|ontology_enrichment_celltype=CL:0002393!3.51e-26!9;CL:0002397!3.51e-26!9;CL:0002057!2.28e-25!42;CL:0000860!2.79e-23!45;CL:0002009!6.08e-19!65;CL:0000766!7.92e-19!76;CL:0002194!5.68e-18!63;CL:0000576!5.68e-18!63;CL:0000040!5.68e-18!63;CL:0000559!5.68e-18!63;CL:0000557!8.11e-17!71;CL:0000839!1.39e-15!70;CL:0000738!1.27e-12!140;CL:0000763!1.18e-11!112;CL:0000049!1.18e-11!112;CL:0002087!1.97e-10!119;CL:0000767!3.02e-10!3;CL:0000875!6.33e-10!3;CL:0002396!6.33e-10!3;CL:0000842!1.60e-09!3;CL:0000037!8.27e-09!172;CL:0000566!8.27e-09!172;CL:0000988!6.54e-08!182;CL:0002031!6.81e-08!124;CL:0000224!3.18e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000767;4.17e-46;3!CL:0000226;4.02e-21;3!CL:0000842;4.02e-21;3!CL:0000094;8.83e-18;8!CL:0000081;4.11e-13;11!CL:0002393;3.14e-11;6!CL:0002397;3.14e-11;6!CL:0000576;8.37e-08;48!CL:0000766;1.79e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,1.92e-46,3;CL:0000226,6.05e-21,3;CL:0000842,6.05e-21,3;CL:0000094,6.63e-18,8;CL:0000766,2.57e-16,72;CL:0002393,4.66e-16,9;CL:0002397,4.66e-16,9;CL:0000081,3.34e-13,11;CL:0000860,4.97e-13,42;CL:0002057,4.97e-13,42;CL:0000738,1.55e-12,136;CL:0000473,2.26e-11,48;CL:0000234,2.26e-11,48;CL:0000763,1.16e-10,108;CL:0000049,1.16e-10,108;CL:0000037,5.90e-10,168;CL:0000988,2.14e-09,177;CL:0002194,4.79e-09,59;CL:0000576,4.79e-09,59;CL:0000040,4.79e-09,59;CL:0000559,4.79e-09,59;CL:0002009,9.58e-09,61;CL:0000839,4.53e-08,66;CL:0000557,6.01e-08,67;CL:0002087,8.21e-08,115;CL:0002032,7.00e-07,161;CL:0000837,7.00e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;4.95e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.94e-18!102;UBERON:0003061!2.94e-18!102;UBERON:0002193!6.53e-16!112;UBERON:0002371!1.31e-15!80;UBERON:0001474!4.49e-14!86;UBERON:0002405!6.13e-14!115;UBERON:0004765!3.25e-12!101;UBERON:0001434!3.25e-12!101;UBERON:0002204!2.26e-08!167;UBERON:0000007!3.36e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002135;1.78e-16;1!UBERON:0000007;6.67e-09;2!UBERON:0002133;6.67e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002135,2.63e-16,1;UBERON:0002390,2.82e-09,98;UBERON:0003061,2.82e-09,98;UBERON:0000007,7.49e-09,2;UBERON:0002133,8.09e-09,2;UBERON:0002193,2.32e-08,108;UBERON:0002371,5.55e-07,76 | |||
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| ||
|short_description=p@chr8:48540648..48540655,+ | |||
}} | }} |
Latest revision as of 18:42, 31 July 2015
Short description: | p@chr8:48540648..48540655, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:48540648..48540655, + |
Coexpression cluster: | C1712_CD14_Peripheral_Basophils_Mast_CD14CD16_CD34_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 1.92e-46 | 3 |
single nucleate cell | 6.05e-21 | 3 |
mononuclear cell | 6.05e-21 | 3 |
granulocyte | 6.63e-18 | 8 |
myeloid leukocyte | 2.57e-16 | 72 |
intermediate monocyte | 4.66e-16 | 9 |
CD14-positive, CD16-positive monocyte | 4.66e-16 | 9 |
blood cell | 3.34e-13 | 11 |
classical monocyte | 4.97e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.97e-13 | 42 |
leukocyte | 1.55e-12 | 136 |
defensive cell | 2.26e-11 | 48 |
phagocyte | 2.26e-11 | 48 |
myeloid cell | 1.16e-10 | 108 |
common myeloid progenitor | 1.16e-10 | 108 |
hematopoietic stem cell | 5.90e-10 | 168 |
hematopoietic cell | 2.14e-09 | 177 |
monopoietic cell | 4.79e-09 | 59 |
monocyte | 4.79e-09 | 59 |
monoblast | 4.79e-09 | 59 |
promonocyte | 4.79e-09 | 59 |
macrophage dendritic cell progenitor | 9.58e-09 | 61 |
myeloid lineage restricted progenitor cell | 4.53e-08 | 66 |
granulocyte monocyte progenitor cell | 6.01e-08 | 67 |
nongranular leukocyte | 8.21e-08 | 115 |
hematopoietic oligopotent progenitor cell | 7.00e-07 | 161 |
hematopoietic multipotent progenitor cell | 7.00e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
mitral valve | 2.63e-16 | 1 |
hematopoietic system | 2.82e-09 | 98 |
blood island | 2.82e-09 | 98 |
pituitary gland | 7.49e-09 | 2 |
atrioventricular valve | 8.09e-09 | 2 |
hemolymphoid system | 2.32e-08 | 108 |
bone marrow | 5.55e-07 | 76 |