FFCP PHASE1:Hg19::chr8:56987059..56987060,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:56987059..56987060,-
|short_description=p3@RPS20
|description=CAGE_peak_3_at_RPS20_5end
|association_with_transcript=-2bp_to_ENST00000518875_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6224 | |EntrezGene=6224 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10405 | |HGNC=10405 | ||
|TSSclassifier=strong | |||
|UniProt=E5RJX2 | |UniProt=E5RJX2 | ||
|association_with_transcript=-2bp_to_ENST00000518875_5end | |||
|cluster_id=chr8:56987059..56987060,- | |||
|description=CAGE_peak_3_at_RPS20_5end | |||
|id=chr8:56987059..56987060,- | |||
|ontology_enrichment_celltype=CL:0000003!3.08e-18!722;CL:0000012!9.62e-17!682;CL:0000548!1.94e-15!679;CL:0000004!1.94e-15!679;CL:0000255!1.94e-15!679;CL:0000144!2.30e-12!625;CL:0000838!3.17e-10!52;CL:0000542!5.71e-10!53;CL:0000051!5.71e-10!53;CL:0002371!5.90e-10!591;CL:0000063!1.15e-09!578;CL:0000034!9.46e-09!444;CL:0002320!9.69e-08!365;CL:0000723!1.23e-07!436;CL:0000048!1.28e-07!430;CL:0000791!2.21e-07!18;CL:0000789!2.21e-07!18;CL:0002420!2.21e-07!18;CL:0002419!2.21e-07!18;CL:0000790!2.21e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.18e-07;18!CL:0000789;2.18e-07;18!CL:0002419;2.18e-07;18!CL:0000542;8.50e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.17e-10,52;CL:0000542,5.71e-10,53;CL:0000051,5.71e-10,53;CL:0000034,4.10e-08,441;CL:0000791,2.21e-07,18;CL:0000789,2.21e-07,18;CL:0002420,2.21e-07,18;CL:0002419,2.21e-07,18;CL:0000790,2.21e-07,18;CL:0002320,3.74e-07,361;CL:0000723,4.75e-07,433;CL:0000048,4.90e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000790;2.18e-07;18!CL:0000051;8.50e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!5.69e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.25e-07,371 | |||
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| ||
|short_description=p3@RPS20 | |||
}} | }} |
Latest revision as of 13:47, 18 September 2015
Short description: | p3@RPS20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RPS20_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_ENST00000518875_5end |
EntrezGene: | RPS20 |
HGNC: | 10405 |
UniProt: | E5RJX2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.17e-10 | 52 |
lymphocyte | 5.71e-10 | 53 |
common lymphoid progenitor | 5.71e-10 | 53 |
stem cell | 4.10e-08 | 441 |
mature alpha-beta T cell | 2.21e-07 | 18 |
alpha-beta T cell | 2.21e-07 | 18 |
immature T cell | 2.21e-07 | 18 |
mature T cell | 2.21e-07 | 18 |
immature alpha-beta T cell | 2.21e-07 | 18 |
connective tissue cell | 3.74e-07 | 361 |
somatic stem cell | 4.75e-07 | 433 |
multi fate stem cell | 4.90e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.25e-07 | 371 |