FFCP PHASE1:Hg19::chr18:21474288..21474320,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:21474288..21474320,- | |||
|coexpression_cluster_id=C363 | |||
|description=CAGE_peak_at_chr18:21474288..21474320,- | |||
|id=chr18:21474288..21474320,- | |||
|ontology_enrichment_celltype=CL:0002076!3.08e-37!43;CL:0000223!1.80e-25!59;CL:0000066!1.86e-20!254;CL:0002251!9.39e-18!21;CL:0002368!2.18e-16!13;CL:0002621!5.72e-12!3;CL:0002536!4.62e-08!2;CL:0002159!7.26e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002621;6.75e-34;3!CL:0000240;2.96e-17;6!CL:0000311;2.96e-17;6!CL:0000079;2.96e-17;6!CL:0000237;2.96e-17;6!CL:0002166;8.75e-16;3!CL:0002076;1.00e-15;42!CL:0002159;5.26e-13;14!CL:0002327;2.40e-12;4!CL:0002336;2.91e-12;1!CL:0002261;2.91e-12;1!CL:0002170;2.91e-12;1!CL:0000312;6.36e-10;5!CL:0002251;4.16e-09;20!CL:0002368;3.94e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,5.40e-34,3;CL:0000240,2.38e-17,6;CL:0000311,2.38e-17,6;CL:0000079,2.38e-17,6;CL:0000237,2.38e-17,6;CL:0000036,2.38e-17,6;CL:0000357,2.38e-17,6;CL:0000114,2.38e-17,6;CL:0002076,5.59e-16,42;CL:0002166,9.09e-16,3;CL:0002159,5.10e-13,14;CL:0002336,2.20e-12,1;CL:0002261,2.20e-12,1;CL:0002170,2.20e-12,1;CL:0002327,2.33e-12,4;CL:0000223,2.48e-11,58;CL:0000312,5.95e-10,5;CL:0002251,3.78e-09,20;CL:0000066,4.67e-09,253;CL:0002368,3.89e-08,13 | |||
|ontology_enrichment_development_v019=CL:0000357;2.96e-17;6!CL:0000114;2.96e-17;6 | |||
|ontology_enrichment_disease=DOID:299!4.58e-09!25;DOID:4468!1.02e-07!2;DOID:1749!1.08e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:4468;9.27e-07;2 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.72e-18!14;UBERON:0000158!1.72e-18!14;UBERON:0004119!1.73e-12!169;UBERON:0000925!1.73e-12!169;UBERON:0006595!1.73e-12!169;UBERON:0001949!5.72e-12!3;UBERON:0003124!7.20e-12!7;UBERON:0001004!4.47e-11!72;UBERON:0000478!4.57e-10!24;UBERON:0000305!1.97e-08!7;UBERON:0001987!5.44e-08!4;UBERON:0004340!5.44e-08!4;UBERON:0004871!2.26e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;6.75e-34;3!UBERON:0000486;5.02e-15;12!UBERON:0003929;6.39e-15;7!UBERON:0003729;6.85e-14;13!UBERON:0003350;3.94e-13;8!UBERON:0001828;3.94e-13;8!UBERON:0001911;2.40e-12;4!UBERON:0001708;4.44e-12;4!UBERON:0008895;4.44e-12;4!UBERON:0011159;7.60e-10;5!UBERON:0000344;4.16e-09;20!UBERON:0010371;6.34e-09;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,5.40e-34,3;UBERON:0003729,5.89e-14,13;UBERON:0003350,3.63e-13,8;UBERON:0001828,3.63e-13,8;UBERON:0001911,2.33e-12,4;UBERON:0005333,2.33e-12,4;UBERON:0008425,2.33e-12,4;UBERON:0005311,2.33e-12,4;UBERON:0001708,4.57e-12,4;UBERON:0008895,4.57e-12,4;UBERON:0011159,7.77e-10,5;UBERON:0000344,3.78e-09,20;UBERON:0010188,2.43e-08,6;UBERON:0002539,2.43e-08,6;UBERON:0008816,2.43e-08,6;UBERON:0003102,5.26e-08,99;UBERON:0000033,9.12e-07,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09217365061275,1.90922284413584,2.29443676311203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.04851312879678,0,1.80952150340936,1.85176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.86358894857377,1.27597587518148,4.29880908973672,3.48760726216754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,4.21063587636898,0.644566922551274,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,1.98341898433174,1.53752053892085,1.02090169995667,0.910420027699949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769776901804097,0.670302275535787,0,0,0,0,0,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.95497793895076,0,2.45728561679386,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,1.06606955203727,0,0,0,0,0,0,0,0,1.26598838716816,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.293977192243133,0.174118413160805,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0.19980960958213,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62164849248911,0.3414369541879,0,0,0,0,0,0.68732060563215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:21474288..21474320,- | |||
}} |
Latest revision as of 23:59, 25 July 2015
Short description: | p@chr18:21474288..21474320, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:21474288..21474320, - |
Coexpression cluster: | C363_Mallassezderived_Gingival_Keratinocyte_Mammary_Prostate_Small_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 5.40e-34 | 3 |
stratified squamous epithelial cell | 2.38e-17 | 6 |
keratin accumulating cell | 2.38e-17 | 6 |
stratified epithelial cell | 2.38e-17 | 6 |
keratinizing barrier epithelial cell | 2.38e-17 | 6 |
epithelial fate stem cell | 2.38e-17 | 6 |
stratified epithelial stem cell | 2.38e-17 | 6 |
surface ectodermal cell | 2.38e-17 | 6 |
endo-epithelial cell | 5.59e-16 | 42 |
epithelial cell of Malassez | 9.09e-16 | 3 |
general ecto-epithelial cell | 5.10e-13 | 14 |
buccal mucosa cell | 2.20e-12 | 1 |
endothelial cell of viscerocranial mucosa | 2.20e-12 | 1 |
keratinized cell of the oral mucosa | 2.20e-12 | 1 |
mammary gland epithelial cell | 2.33e-12 | 4 |
endodermal cell | 2.48e-11 | 58 |
keratinocyte | 5.95e-10 | 5 |
epithelial cell of alimentary canal | 3.78e-09 | 20 |
epithelial cell | 4.67e-09 | 253 |
respiratory epithelial cell | 3.89e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 5.40e-34 | 3 |
mouth mucosa | 5.89e-14 | 13 |
epithelium of mucosa | 3.63e-13 | 8 |
gingiva | 3.63e-13 | 8 |
mammary gland | 2.33e-12 | 4 |
mammary bud | 2.33e-12 | 4 |
mammary ridge | 2.33e-12 | 4 |
mammary placode | 2.33e-12 | 4 |
jaw skeleton | 4.57e-12 | 4 |
splanchnocranium | 4.57e-12 | 4 |
primary subdivision of cranial skeletal system | 7.77e-10 | 5 |
mucosa | 3.78e-09 | 20 |
protuberance | 2.43e-08 | 6 |
pharyngeal arch | 2.43e-08 | 6 |
embryonic head | 2.43e-08 | 6 |
surface structure | 5.26e-08 | 99 |
head | 9.12e-07 | 56 |