FFCP PHASE1:Hg19::chr18:46550026..46550037,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-35bp_to_uc002ldh.2_5end | |||
|cluster_id=chr18:46550026..46550037,+ | |||
|coexpression_cluster_id=C183 | |||
|description=CAGE_peak_1_at_uc002ldh.2_5end | |||
|id=chr18:46550026..46550037,+ | |||
|ontology_enrichment_celltype=CL:0000784!4.88e-20!3;CL:0001024!1.16e-15!1 | |||
|ontology_enrichment_celltype_v019=CL:0000817;1.23e-66;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000817,2.62e-23,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!6.30e-07!51;DOID:0060083!6.30e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.66e-15!4;UBERON:0005058!1.66e-15!4;UBERON:0009113!1.66e-15!4;UBERON:0003295!1.66e-15!4;UBERON:0005562!1.66e-15!4;UBERON:0002372!2.75e-15!1;UBERON:0001961!2.75e-15!1;UBERON:0001744!2.75e-15!1;UBERON:0001735!2.75e-15!1;UBERON:0001042!1.60e-13!10;UBERON:0009145!1.60e-13!10;UBERON:0006562!2.39e-12!11;UBERON:0003351!1.18e-10!6;UBERON:0004177!2.92e-09!7;UBERON:0001557!2.22e-07!19;UBERON:0000974!9.76e-07!10;UBERON:0003408!9.76e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.75e-130;2!UBERON:0005058;1.75e-130;2!UBERON:0009113;1.75e-130;2!UBERON:0004177;3.74e-53;5!UBERON:0005057;3.74e-53;5!UBERON:0000077;6.90e-11;27!UBERON:0002405;6.90e-11;27!UBERON:0002390;2.59e-07;32!UBERON:0002368;2.59e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.67e-66,4;UBERON:0005058,4.67e-66,4;UBERON:0009113,4.67e-66,4;UBERON:0003295,4.67e-66,4;UBERON:0005562,4.67e-66,4;UBERON:0003351,1.52e-44,6;UBERON:0004177,2.18e-38,7;UBERON:0005057,2.18e-38,7;UBERON:0000974,2.72e-27,10;UBERON:0003408,2.72e-27,10;UBERON:0001042,2.72e-27,10;UBERON:0009145,2.72e-27,10;UBERON:0006562,6.20e-25,11;UBERON:0009722,6.20e-25,11;UBERON:0007690,6.20e-25,11;UBERON:0008814,9.75e-16,18;UBERON:0001557,5.66e-15,19;UBERON:0004807,1.54e-10,28;UBERON:0000077,3.24e-10,29;UBERON:0002368,1.18e-08,35;UBERON:0000949,5.75e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.51188356561025,0.0711418433484141,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35636710655613,3.28995985768047,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p1@uc002ldh.2 | |||
}} |
Latest revision as of 01:09, 26 July 2015
Short description: | p1@uc002ldh.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc002ldh.2_5end |
Coexpression cluster: | C183_acute_non_CD34_diffuse_CD133_myeloma_Burkitt |
Association with transcript: | -35bp_to_uc002ldh.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 2.62e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.67e-66 | 4 |
hemolymphoid system gland | 4.67e-66 | 4 |
thymic region | 4.67e-66 | 4 |
pharyngeal gland | 4.67e-66 | 4 |
thymus primordium | 4.67e-66 | 4 |
pharyngeal epithelium | 1.52e-44 | 6 |
hemopoietic organ | 2.18e-38 | 7 |
immune organ | 2.18e-38 | 7 |
neck | 2.72e-27 | 10 |
gland of gut | 2.72e-27 | 10 |
chordate pharynx | 2.72e-27 | 10 |
pharyngeal region of foregut | 2.72e-27 | 10 |
pharynx | 6.20e-25 | 11 |
entire pharyngeal arch endoderm | 6.20e-25 | 11 |
early pharyngeal endoderm | 6.20e-25 | 11 |
pharyngeal arch system | 9.75e-16 | 18 |
upper respiratory tract | 5.66e-15 | 19 |
respiratory system epithelium | 1.54e-10 | 28 |
mixed endoderm/mesoderm-derived structure | 3.24e-10 | 29 |
endocrine gland | 1.18e-08 | 35 |
endocrine system | 5.75e-07 | 45 |