FFCP PHASE1:Hg19::chr19:17417001..17417030,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:17417001..17417030,+ | |||
|description=CAGE_peak_at_chr19:17417001..17417030,+ | |||
|id=chr19:17417001..17417030,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.92e-10;3!CL:0000136;7.50e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.32e-10,3;CL:0000136,1.20e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.04e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.92e-10;3!UBERON:0000920;1.92e-10;3!UBERON:0005904;1.24e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.32e-10,3;UBERON:0007023,4.09e-10,114;UBERON:0004876,8.66e-10,11;UBERON:0003887,8.67e-09,12;UBERON:0000080,1.73e-08,9;UBERON:0002120,1.73e-08,9;UBERON:0004875,1.73e-08,9;UBERON:0005721,1.73e-08,9;UBERON:0005754,1.73e-08,9;UBERON:0007297,1.73e-08,9;UBERON:0005904,1.33e-07,4 | |||
|phase1_expression=1.63510541343501,0.214100523890983,1.26858963686374,0,3.12872766099101,0.872338524100369,2.53299878168311,0,0.261185628199839,0.245733936501509,1.39560233594486,0,0.263766978228454,0,0,0,0,0,0,0,0.612002073732759,0,0,0,0,0.229240217243854,0.328402357799783,0.0787107813136792,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0.387336002901508,0,0,0,0,0.434021741431704,0.671746422719773,0.971680998056939,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422510572623884,0.425208599930087,0.419317291016752,0.22465726229299,0.150176892841506,0.16072558669708,0.570025487482497,0,0.182664153764634,0,1.63841583378639,0.889509253863555,0.426730222566507,0,0,0,0.954053754535364,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0.334372990781356,0.32592226663359,0,0,0.334231370655521,0.294605907474837,0.443067789167242,0.270803863765016,0.384273959177026,0.520237390239513,0.328875809207352,0.552700035571697,0.289803085735052,0.444859689486181,0,0,0.339928028092699,0.766440987203842,0,0,0,1.30216690771284,0,0.301150238155546,0.511946444617674,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0,0,0.579386075843295,0.795285947051099,0,0.0945348171640679,0.443458794925128,0.175669571386252,0,0,0.370784442784429,0,0.174129737299267,0.930705723632056,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0.886413581652058,0,0,0.354668382198357,0,0,1.2333377420858,0,0.538842688278752,0.163461903113459,0.151357427644931,0,0,0,0,0.448346041655403,0.352303495931295,0.161872944368132,0.140450806702248,0.204154171254893,0.122834317311768,0.103325781175765,0,0.989067717114227,0,0.718618141816238,0,0.375355559615893,0,0,0,0.150238058906597,0,0,0,0,0,0.206105058476878,0,0.18611685633159,0,0.389748020644795,0,0.184099797284599,0.323292113637624,0,0,0,0.386521706326594,0,0,0.365921118388786,0.132529768321485,0.232387885739037,0.207322110030741,0,1.09493207722749,0,0,0,0,0,0.709840800239063,0.337169380156203,0,0.882351781859152,0.653638332277218,0.474541238222193,0.539325232640658,0,0.38474715694639,0,0,0,0,0,3.9313088667105,0.590789906681404,0,0.122988438543114,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0,0,0.492434012174795,0.702012795417713,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0.528290604079356,1.03664057770386,0.288239906833923,0.37872730027914,0,0,0,1.71072446022705,0.205654985406647,0.901029173531752,0.571652865261156,0,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,1.50677127429638,0,0,1.14861935834114,0,0.144781306667579,0,0.179060963239896,0,0,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0,0.500170521059677,0.271265023699736,0.207970861530807,0.356857977594324,0,0.234282829985426,0.601892199455438,0,0,0,0.184369168541703,0.347534457872331,0.391602314925481,0,0,0,0,0.303127571446259,0,0.30239029332968,0.744323423456331,0,0,0.384417447767103,0,0,1.48418066444991,0.308419387605311,0.887808626565635,0.164254312027618,0,0.348631135379878,0.483437798366489,0.200506470303285,1.01289087829486,0.114814448164607,0,0.131124414959424,0,0,0.784349769176855,0,0,1.13733384070897,0.170093705276516,0,1.54227252690289,0,0,0,0,0,0,0.522870902049801,0.512900250232778,0,0.325378394664303,0.103041011647722,0,0.165018999841176,0,0.650060246036521,1.6068392984416,0.290012154876366,0,0.15350367472613,0.413509717453592,0.107420244868274,0.145016693914229,0.0852266274161009,0,0.661139661443912,0.192190067365106,0,0.30347334256665,0,0,0,0,0.532306030317022,0,0,0.143124886741991,0,0.316379424718726,0.38126038784765,0,0,0,0,0.179872457583315,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0,1.15755106853338,0.655894752046633,0,0,0.281695602532241,0,0,0,0.354761064070598,0.422215270595328,1.31717957183961,0.379473173765715,0,0.192444225451024,0,0,0.470719003883896,0,0,0.886860307073351,0,0,0,0,0,0.411362273086194,0,0,0,0.213648142254946,0,0,0.371606350251437,0.28853842595289,0.0711418433484141,0,0.399158742865633,0.191505370132367,0,0.324621940274555,0.280797178113459,0,0.47003968731907,0,0.169291777801603,0,0,0,0,0,0,0.166849141711909,0.390776190804081,0,0,0.270455678475983,0,0,0.18714054040822,1.02555725490326,0.121360521749513,0.222886768554957,0.284136146806413,0,3.56357616999166,0,0,0,0.445234820091624,0.494411622680279,0,0,0.276283915531148,0.251932747854276,0,0,0,0.0898683511473268,0.179021174675609,0,0.887790650732402,0,0,0.969332746095218,0.556608588971108,0,0,0.0874599999961957,2.89999830173917,0,0,0.236387681767936,0.689486746482929,0,0.520874984799877,0,0,0,0.110579259931225,0.886642856860642,0.658156191461918,0.32681539055697,0,0.307801034015188,0.341826167541004,0,1.88491053260521,0.108647371922008,1.27600463892768,2.10674464824283,1.06606955203727,1.02193298195737,0,0,0.22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| |||
|short_description=p@chr19:17417001..17417030,+ | |||
}} |
Latest revision as of 04:51, 26 July 2015
Short description: | p@chr19:17417001..17417030, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:17417001..17417030, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.32e-10 | 3 |
fat cell | 1.20e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.32e-10 | 3 |
adult organism | 4.09e-10 | 114 |
urogenital ridge | 8.66e-10 | 11 |
intraembryonic coelom | 8.67e-09 | 12 |
mesonephros | 1.73e-08 | 9 |
pronephros | 1.73e-08 | 9 |
nephrogenic cord | 1.73e-08 | 9 |
pronephric mesoderm | 1.73e-08 | 9 |
rostral part of nephrogenic cord | 1.73e-08 | 9 |
presumptive pronephric mesoderm | 1.73e-08 | 9 |
duct of male reproductive system | 1.33e-07 | 4 |