FFCP PHASE1:Hg19::chr19:39086748..39086755,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:39086748..39086755,- | |||
|description=CAGE_peak_at_chr19:39086748..39086755,- | |||
|id=chr19:39086748..39086755,- | |||
|ontology_enrichment_celltype=CL:0002322!1.93e-19!5;CL:0000039!1.63e-13!7;CL:0000586!1.63e-13!7;CL:0000540!2.26e-10!6;CL:0000031!2.26e-10!6;CL:0000404!2.26e-10!6;CL:0000047!8.94e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.06e-52;5!CL:0002321;1.88e-17;15!CL:0000540;1.31e-16;6!CL:0000404;1.31e-16;6!CL:0000039;4.44e-14;7!CL:0000586;4.44e-14;7!CL:0000313;5.62e-12;1!CL:0000148;5.19e-10;10!CL:0000147;2.71e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.59e-52,5;CL:0000540,1.46e-16,6;CL:0000031,1.46e-16,6;CL:0000404,1.46e-16,6;CL:0000039,4.55e-14,7;CL:0000586,4.55e-14,7;CL:0000047,1.43e-12,8;CL:0000313,4.06e-12,1;CL:0000148,5.44e-10,10;CL:0000541,5.44e-10,10;CL:0000147,2.80e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.56e-17;10!UBERON:0005564;4.56e-17;10!CL:0000031;1.31e-16;6!UBERON:0000358;1.01e-11;1 | |||
|ontology_enrichment_disease=DOID:3095!6.17e-12!22;DOID:2994!6.17e-12!22;DOID:305!9.92e-09!106;DOID:0050687!1.45e-08!143;DOID:5409!1.78e-08!4;DOID:1325!2.19e-08!7;DOID:3904!2.19e-08!7 | |||
|ontology_enrichment_disease_v019=DOID:2152;5.62e-12;1!DOID:1325;8.58e-07;7!DOID:3904;8.58e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,4.06e-12,1;DOID:1325,9.10e-07,7;DOID:3904,9.10e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0000473!4.22e-16!8;UBERON:0003135!1.60e-11!11;UBERON:0000991!5.07e-10!21;UBERON:0009196!5.07e-10!21;UBERON:0009117!5.07e-10!21;UBERON:0005564!5.07e-10!21;UBERON:0004176!1.67e-09!22;UBERON:0003101!3.38e-09!22;UBERON:0000079!3.38e-09!22;UBERON:0005156!7.09e-09!59;UBERON:0000990!7.09e-09!59;UBERON:0002323!8.41e-09!46;UBERON:0003133!1.82e-08!48;UBERON:0004458!4.14e-08!49 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.09e-12;49!UBERON:0000473;2.16e-12;8!UBERON:0004911;5.62e-12;1!UBERON:0003135;3.68e-09;11!UBERON:0000991;3.05e-08;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.20e-12,8;UBERON:0004911,4.06e-12,1;UBERON:0003135,3.73e-09,11;UBERON:0000991,2.91e-08,21;UBERON:0009196,2.91e-08,21;UBERON:0009117,2.91e-08,21;UBERON:0005564,2.91e-08,21;UBERON:0004176,6.79e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.29329006549908,3.44577397635862,3.02104251460748,1.34759371519982,3.5324919122588,7.66452454059243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2882828526349,0,0,0,0,0,0,0,0,0,0,0,0.975966209950223,0,0,0,0,0.977826347298073,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34797542718508,0,0,0,0,0,0,0.311064574191741,0,0,0,0,9.96133411104275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0.391102765469606,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798716001995964,0,0,0,0,0,0,0,0,0,0,0,0,3.21506296930038,3.30094647833361,5.40072439437941,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629063767423586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,3.57937381752935,0,0,0,0,0,0,0.233939463462106,0,0,0.11294608203896,0.219881033490858,1.05673990496671,0,0,0,0,0.235676547101626,0,0,0.4226557275834,0,0,0,0,0.892769693028288,0,0,0,0,0,0,0,0,1.5870805215462,0,0,0,0.504665699340316,0.109265571963696,0,0.917899467677836,9.08539177902906,1.65410819162721,2.005660314339,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,2.34640942403454,0,0,0,0,0 | |||
|short_description=p@chr19:39086748..39086755,- | |||
}} |
Latest revision as of 07:21, 26 July 2015
Short description: | p@chr19:39086748..39086755, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:39086748..39086755, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.59e-52 | 5 |
neuron | 1.46e-16 | 6 |
neuroblast | 1.46e-16 | 6 |
electrically signaling cell | 1.46e-16 | 6 |
germ line cell | 4.55e-14 | 7 |
germ cell | 4.55e-14 | 7 |
neuronal stem cell | 1.43e-12 | 8 |
serous secreting cell | 4.06e-12 | 1 |
melanocyte | 5.44e-10 | 10 |
melanoblast | 5.44e-10 | 10 |
pigment cell | 2.80e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
testis | 2.20e-12 | 8 |
epithelium of female gonad | 4.06e-12 | 1 |
male reproductive organ | 3.73e-09 | 11 |
gonad | 2.91e-08 | 21 |
indifferent external genitalia | 2.91e-08 | 21 |
indifferent gonad | 2.91e-08 | 21 |
gonad primordium | 2.91e-08 | 21 |
external genitalia | 6.79e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 4.06e-12 | 1 |
bronchus cancer | 9.10e-07 | 7 |
bronchogenic carcinoma | 9.10e-07 | 7 |