FFCP PHASE1:Hg19::chr19:42259465..42259476,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4680 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1818 | |||
|TSSclassifier=strong | |||
|UniProt=P40199 | |||
|association_with_transcript=67bp_to_NM_002483,uc002orm.2_5end | |||
|cluster_id=chr19:42259465..42259476,+ | |||
|coexpression_cluster_id=C742 | |||
|description=CAGE_peak_2_at_CEACAM6_5end | |||
|id=chr19:42259465..42259476,+ | |||
|ontology_enrichment_celltype=CL:0002076!7.52e-18!43;CL:0000223!1.55e-13!59;CL:0002251!9.10e-10!21;CL:0002368!4.52e-08!13;CL:0000244!4.81e-08!4;CL:0000731!4.81e-08!4;CL:0000066!7.05e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0000244;6.16e-14;4!CL:0000731;6.16e-14;4!CL:0002368;5.24e-07;13!CL:0002076;6.67e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,4.05e-14,4;CL:0000731,4.05e-14,4;CL:0002076,1.91e-08,42;CL:0002368,5.31e-07,13 | |||
|ontology_enrichment_development_v019=UBERON:0006595;5.06e-08;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.03e-33!169;UBERON:0000925!3.03e-33!169;UBERON:0006595!3.03e-33!169;UBERON:0001007!9.59e-27!155;UBERON:0001555!9.59e-27!155;UBERON:0007026!9.59e-27!155;UBERON:0004921!8.75e-25!129;UBERON:0004185!8.75e-25!129;UBERON:0000077!8.57e-19!130;UBERON:0001004!2.53e-17!72;UBERON:0005911!2.67e-15!82;UBERON:0000161!2.30e-13!35;UBERON:0000065!1.32e-12!53;UBERON:0001041!3.33e-11!98;UBERON:0001046!1.12e-10!19;UBERON:0005409!1.67e-10!35;UBERON:0005178!3.33e-10!34;UBERON:0002224!3.33e-10!34;UBERON:0005181!8.64e-10!35;UBERON:0000160!1.91e-09!27;UBERON:0000365!2.35e-09!5;UBERON:0002294!3.67e-09!7;UBERON:0001173!3.67e-09!7;UBERON:0004912!3.67e-09!7;UBERON:0000464!6.28e-09!104;UBERON:0000466!1.73e-08!126;UBERON:0000166!3.09e-08!21;UBERON:0005910!1.05e-07!6;UBERON:0000059!1.92e-07!11;UBERON:0005153!2.88e-07!37;UBERON:0000481!5.60e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.34e-12;33!UBERON:0000365;3.56e-11;5!UBERON:0005910;2.49e-09;6!UBERON:0003127;7.57e-09;2!UBERON:0005409;1.03e-08;22!UBERON:0006562;1.15e-08;2!UBERON:0000341;4.11e-08;2!UBERON:0000065;6.51e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.51e-22,160;UBERON:0000925,1.51e-22,160;UBERON:0006595,1.51e-22,160;UBERON:0004921,1.54e-14,118;UBERON:0001007,3.78e-14,145;UBERON:0001555,3.78e-14,145;UBERON:0007026,3.78e-14,145;UBERON:0001004,2.02e-13,74;UBERON:0000065,3.84e-12,54;UBERON:0000365,2.55e-11,5;UBERON:0005910,1.90e-09,6;UBERON:0003127,8.18e-09,2;UBERON:0001041,1.82e-08,87;UBERON:0000341,4.19e-08,2;UBERON:0005409,1.33e-07,25;UBERON:0005178,1.96e-07,34;UBERON:0002224,1.96e-07,34;UBERON:0005181,3.56e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61958150995425,0.728590576585084,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7057456479485,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0.966875596732978,0.601519410909855,9.02393691571784,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.06760902499956,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14041339185858,5.18913181885787,6.63586104971837,4.55210013849975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,3.35151137767894,0,11.4855436947671,2.58303223602738,1.68471475667626,1.7737206141467,1.83778720165568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383010740264733,0.635020748171649,0,0,0,1.56679895773023,0,0,0,0,0,0.343505344755765,0,0,0.333698283423817,0,0,0,0,0,0,2.05854594449042,0,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,2.21027132424918,0,0,0,0,0.359473404589307,8.77203755910485,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,3.46276163267087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989471500037586,0,1.99052386215701,0.796118080530053,6.72133159426988,0,0,0,0.067401132980677,0,0,0,2.54364004611717,0,0,2.41981432097328,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,13.190506242425,0,3.84167259326905,0,0,0,10.5597746676794,0.160317640503067,12.8071796843612,0,18.2994829785715,0,0,1.29649318189335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,2.22412889249628,107.131883392134,36.5212950981516,0.78602152549833,8.28478110694391,0,0,0,0,0,0,0,0,2.35581144375351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,1.11903606175556,0.622077260032973,0,0,0,0,0,0,7.43614585554013,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0.825788063434183,1.10057159113007,0,0,0,0,0.0752103283492573,0,0,0,0,0.443568258651136,0,0,0,0,0,0,1.98484471355718,0,4.34392253974624,0,0,0,0,0,0,0,0,0,0.118193840883968,0.222462803784138,0,0,0.840816489941367,0.913158720509496,0,0,0,0,0,0,0,0.414432328326074,0,0,7.31386509994472,0,0,0,0.22910686854405,0,0,0,2.65005630761156,0,0,0,0,0.485710993059139,0,0,0,1.01651473835064,0,0.301925687133347,1.389134845943,0.655678681511872,1.41095188908457,0,6.12759022464227,0,0,0,0,0,0.966868319603658,0,0.178553938605658,0,0,0,2.2936464170227,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.4779136199206,1.42838658878244,0.193766729508018,0.372448285775147,0,0,0,4.57205170583619,2.73786640868225,7.13931761954628,20.8711617692688,4.32458463509817,0.488419611665847,0,0,0.269475606319761,0,0.122241444182866,0,1.99727032255654,0,0 | |||
|short_description=p2@CEACAM6 | |||
}} |
Latest revision as of 06:21, 18 September 2015
Short description: | p2@CEACAM6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CEACAM6_5end |
Coexpression cluster: | C742_lung_gastric_trachea_bile_esophagus_gall_neuroectodermal |
Association with transcript: | 67bp_to_NM_002483, uc002orm.2_5end |
EntrezGene: | CEACAM6 |
HGNC: | 1818 |
UniProt: | P40199 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 4.05e-14 | 4 |
urothelial cell | 4.05e-14 | 4 |
endo-epithelial cell | 1.91e-08 | 42 |
respiratory epithelial cell | 5.31e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.51e-22 | 160 |
endoderm | 1.51e-22 | 160 |
presumptive endoderm | 1.51e-22 | 160 |
subdivision of digestive tract | 1.54e-14 | 118 |
digestive system | 3.78e-14 | 145 |
digestive tract | 3.78e-14 | 145 |
primitive gut | 3.78e-14 | 145 |
respiratory system | 2.02e-13 | 74 |
respiratory tract | 3.84e-12 | 54 |
urothelium | 2.55e-11 | 5 |
transitional epithelium | 1.90e-09 | 6 |
open tracheal system trachea | 8.18e-09 | 2 |
foregut | 1.82e-08 | 87 |
throat | 4.19e-08 | 2 |
gastrointestinal system | 1.33e-07 | 25 |
thoracic cavity element | 1.96e-07 | 34 |
thoracic cavity | 1.96e-07 | 34 |
thoracic segment organ | 3.56e-07 | 35 |