FFCP PHASE1:Hg19::chr1:147230763..147230786,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:147230763..147230786,- | |||
|description=CAGE_peak_at_chr1:147230763..147230786,- | |||
|id=chr1:147230763..147230786,- | |||
|ontology_enrichment_celltype=CL:0002541!8.45e-13!3;CL:0000349!1.34e-12!3;CL:0002577!1.34e-12!3;CL:0002536!1.14e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002541;7.16e-46;3!CL:0000349;1.29e-28;19!CL:0002577;1.23e-21;3!CL:0002545;4.89e-09;2!CL:0002536;7.21e-09;2!CL:1000413;1.02e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,6.63e-46,3;CL:0000349,1.46e-28,19;CL:0002577,1.59e-21,3;CL:0002545,5.08e-09,2;CL:0002536,7.49e-09,2;CL:1000413,9.52e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0010227;9.57e-17;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;5.53e-17;1!DOID:10165;5.53e-17;1!DOID:1798;5.53e-17;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,4.72e-17,1;DOID:10165,4.72e-17,1;DOID:1798,4.72e-17,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!8.74e-32!14;UBERON:0000158!8.74e-32!14;UBERON:0003124!3.45e-27!7;UBERON:0000478!1.64e-17!24;UBERON:0001987!3.81e-16!4;UBERON:0004340!3.81e-16!4;UBERON:0000476!8.45e-13!3;UBERON:0000920!8.45e-13!3;UBERON:0007023!6.91e-10!115;UBERON:0000305!5.82e-09!7;UBERON:0004175!1.85e-08!25;UBERON:0004871!7.67e-08!8;UBERON:0003975!1.31e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;7.16e-46;3!UBERON:0000920;7.16e-46;3!UBERON:0005631;1.70e-24;10!UBERON:0000158;1.70e-24;10!UBERON:0000478;1.23e-22;24!UBERON:0002079;9.57e-17;1!UBERON:0001987;1.72e-16;4!UBERON:0002171;2.08e-16;1!UBERON:0006518;2.08e-16;1!UBERON:0008949;2.08e-16;1!UBERON:0000101;2.08e-16;1!UBERON:0002167;2.08e-16;1!UBERON:0005800;4.89e-09;2!UBERON:0002081;4.89e-09;2!UBERON:0001515;4.89e-09;2!UBERON:0003915;1.02e-07;9!UBERON:0004700;1.02e-07;9!UBERON:0001917;1.02e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,3.12e-54,7;UBERON:0000920,6.63e-46,3;UBERON:0005631,9.03e-39,14;UBERON:0000158,9.03e-39,14;UBERON:0000478,1.35e-22,24;UBERON:0002079,7.57e-17,1;UBERON:0001987,2.09e-16,4;UBERON:0004340,2.09e-16,4;UBERON:0002171,3.07e-16,1;UBERON:0006518,3.07e-16,1;UBERON:0008949,3.07e-16,1;UBERON:0000101,3.07e-16,1;UBERON:0002167,3.07e-16,1;UBERON:0002081,4.34e-09,2;UBERON:0010227,4.34e-09,2;UBERON:0005800,5.08e-09,2;UBERON:0001515,5.08e-09,2;UBERON:0004923,4.41e-08,66;UBERON:0003915,9.52e-08,9;UBERON:0004700,9.52e-08,9;UBERON:0001917,9.52e-08,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,1.58260186937072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92582629358047,0,0,0,0,0,0,0,0,2.43042584364528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,3.32870879020994,2.11673205330776,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.439524537815682,0,0,0,0.71623345421307,0,0.307160702099232,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0.922255617552241,3.41079048757134,0.434589487688032,1.27600463892768,1.74035427463538,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.0524545881349981,0,0,0,2.85878130549347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,3.66669372273991,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0.227662191351298,0.532214220975833,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0.410651227424988,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0.378893491091197,0,0,0,0.213233981900981,0,0,0,0,0.0636471582781649,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0.122241444182866,0,0.665756774185513,0,0 | |||
|short_description=p@chr1:147230763..147230786,- | |||
}} |
Latest revision as of 20:55, 27 July 2015
Short description: | p@chr1:147230763..147230786, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:147230763..147230786, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 6.63e-46 | 3 |
extraembryonic cell | 1.46e-28 | 19 |
placental epithelial cell | 1.59e-21 | 3 |
thoracic aorta endothelial cell | 5.08e-09 | 2 |
amniotic epithelial cell | 7.49e-09 | 2 |
endothelial cell of artery | 9.52e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
chorion | 3.12e-54 | 7 |
egg chorion | 6.63e-46 | 3 |
extraembryonic membrane | 9.03e-39 | 14 |
membranous layer | 9.03e-39 | 14 |
extraembryonic structure | 1.35e-22 | 24 |
left cardiac atrium | 7.57e-17 | 1 |
placenta | 2.09e-16 | 4 |
allantois | 2.09e-16 | 4 |
lower lobe of right lung | 3.07e-16 | 1 |
right lung lobe | 3.07e-16 | 1 |
lower lobe of lung | 3.07e-16 | 1 |
lobe of lung | 3.07e-16 | 1 |
right lung | 3.07e-16 | 1 |
cardiac atrium | 4.34e-09 | 2 |
future cardiac atrium | 4.34e-09 | 2 |
segment of aorta | 5.08e-09 | 2 |
thoracic aorta | 5.08e-09 | 2 |
organ component layer | 4.41e-08 | 66 |
endothelial tube | 9.52e-08 | 9 |
arterial system endothelium | 9.52e-08 | 9 |
endothelium of artery | 9.52e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 4.72e-17 | 1 |
endocrine pancreas cancer | 4.72e-17 | 1 |
pancreatic endocrine carcinoma | 4.72e-17 | 1 |