FFCP PHASE1:Hg19::chr1:151955393..151955422,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:151955393..151955422,+ | |||
|description=CAGE_peak_at_chr1:151955393..151955422,+ | |||
|id=chr1:151955393..151955422,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.89e-11!42;CL:0000860!1.56e-10!45;CL:0002009!1.21e-08!65;CL:0000548!1.27e-08!679;CL:0000004!1.27e-08!679;CL:0000255!1.27e-08!679;CL:0000012!2.79e-08!682;CL:0002194!1.18e-07!63;CL:0000576!1.18e-07!63;CL:0000040!1.18e-07!63;CL:0000559!1.18e-07!63;CL:0000003!1.72e-07!722;CL:0000557!2.31e-07!71;CL:0002371!9.10e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0002577;8.88e-16;3!CL:0000860;9.79e-12;33!CL:0002057;9.79e-12;33!CL:0000473;6.57e-09;39!CL:0000234;6.57e-09;39!CL:0000135;1.86e-07;3!CL:0000214;1.86e-07;3!CL:0000388;1.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,4.93e-16,3;CL:0000860,1.25e-09,42;CL:0002057,1.25e-09,42;CL:0000473,3.31e-08,48;CL:0000234,3.31e-08,48;CL:0000214,8.17e-08,3;CL:0000135,1.03e-07,3;CL:0000388,1.03e-07,3;CL:0002009,2.34e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;1.87e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!7.69e-09!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;5.85e-12;4!UBERON:0000078;9.01e-11;2!UBERON:0002012;9.01e-11;2!UBERON:0008886;9.01e-11;2!UBERON:0007846;1.86e-07;3!UBERON:0006915;1.86e-07;3!UBERON:0007616;1.86e-07;3!UBERON:0000043;1.86e-07;3!UBERON:0007845;1.86e-07;3!UBERON:0002217;1.86e-07;3!UBERON:0002018;1.86e-07;3!UBERON:0000478;3.40e-07;24!UBERON:0000486;8.55e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,3.77e-12,4;UBERON:0004340,3.77e-12,4;UBERON:0003124,4.71e-12,7;UBERON:0000078,2.54e-10,2;UBERON:0007497,2.54e-10,2;UBERON:0003643,2.54e-10,2;UBERON:0003504,2.54e-10,2;UBERON:0003469,2.54e-10,2;UBERON:0003496,2.54e-10,2;UBERON:0002012,2.54e-10,2;UBERON:0008886,2.54e-10,2;UBERON:0007303,2.54e-10,2;UBERON:0002061,2.54e-10,2;UBERON:0005432,2.54e-10,2;UBERON:0004363,2.54e-10,2;UBERON:0005631,4.08e-09,14;UBERON:0000158,4.08e-09,14;UBERON:0006915,8.17e-08,3;UBERON:0007616,8.17e-08,3;UBERON:0002217,8.17e-08,3;UBERON:0002018,8.17e-08,3;UBERON:0007846,1.03e-07,3;UBERON:0000043,1.03e-07,3;UBERON:0007845,1.03e-07,3;UBERON:0000478,2.98e-07,24;UBERON:0004145,3.68e-07,3;UBERON:0003081,8.91e-07,203 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0.218441372130172,0.263766978228454,1.11389717664042,0.662794751455832,0,0,0,0,0,0,0.626909442956176,0,0.273748850145768,0.376627918784408,0,0,0,0,0.383829398097213,0.309632246632152,0.919421224478927,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.726991193897824,0.377875943688809,1.21292030593908,1.16214518452842,0,0.619412741790207,1.1507695692886,0.512321413058201,1.18241114944293,1.03423704220986,0.645484683583826,0,1.12945403725563,0.545812300115692,1.12361742222542,1.83650335422542,0,0,0.989553900560148,0.797854630486527,0.426224750532694,1.45104619314292,0,0,0.75374599577023,1.0429658368404,0.434377689410233,0.605399502633369,0,0.949387162322653,0,0.212604299965044,0.838634582033504,0.22465726229299,0.450530678524519,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0.512365278902701,0.260118695119756,0.164437904603676,1.38175008892924,0,0.14828656316206,0,0,0,0,0,0,0.95569624297229,0.651083453856419,0,0,0.127986611154418,0,0.236777252044017,0.821127996921047,0.403213486449465,0,0.144824403882799,0,0,0.511450247374121,0,0.50133791063589,0.144846518960824,0,0,0.0945348171640679,0.665188192387692,0.175669571386252,0,0,0.741568885568859,0.324547393654683,0.174129737299267,0.132957960518865,0.715471872916026,0,0,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0.402829317109147,1.52054421143703,0.24406205754817,0,0,0.0892997282840798,0.673588117878509,0,0,0,0.549605231791222,0,0,0.436094052142534,0.496971951695318,0.506522046658319,0,0,0,0,0,0,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0.280901613404497,0.204154171254893,0.368502951935304,0,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0,0,1.02088964844019,0,0,0,0,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,2.51239109112286,0.272746120590835,0.286804595389004,0,0,0,0,0,0.36497735907583,0,0,0,0,1.44375896333917,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0,0.269662616320329,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0.703702806881416,0.555530670951178,0,1.03993478527958,0,0,0,0.144366447761074,0,0,1.58040879591855,0,0.984868024349589,0,0.148631162288728,0,0,0.141775097242386,0.447792613514241,0.290633938513962,0.383382679165211,0,0,0,0.144119953416961,0,0.190493682876507,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,0,0,0,1.62868092146868,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,1.27587750330633,0,0,0,0,0.500170521059677,0.271265023699736,0.207970861530807,0.892144943985809,0.473107245101804,0.234282829985426,0,0,0,0,0.184369168541703,0.260650843404249,0,0,0,0,0.106727557803444,5.45629628603267,1.66435439510497,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.601519410909855,0.0920809889358963,0.229628896329213,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,1.00337954770971,0,0,0.671624264166535,0,0,0,0,0,0.103041011647722,0.183138929636687,0.247528499761764,0,0,1.6068392984416,0.193341436584244,0.154048617114644,0.15350367472613,0,0.107420244868274,0.435050081742686,0.0852266274161009,0,0.991709492165869,0.768760269460425,0.127612712494584,0.10115778085555,0.464845549297286,0,2.0911118104818,0.308033580176089,0.532306030317022,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0.179872457583315,0.54907405947211,0,0.606547444719948,0,0,0,0.487426979262569,0,0,0.282810863907425,1.13008116620243,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0.143411352204052,0.196498082026242,0.35667105148125,0.709522128141196,1.47775344708365,1.97576935775941,0.379473173765715,0,0.0962221127255121,0,1.08890984861323,0,0.43050537267123,0,1.33029046061003,0.459446800413919,0,0,0.569647187174163,0,0.411362273086194,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0.66866030566487,0,7.40107902686839,0.593929361665277,0.614321404198464,0,0,0,0.16480387422676,0.211125408127993,0,0,0,0.20453736500431,0,0.311039587661807,0,0.179021174675609,0,0,0,0,0,0,0,0.520855522170466,0,0,0.1137934482855,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0.113942055847001,0.23056390438806,0,0.325942115766024,4.46601623624687,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,0,0.171986032471617,0,0,0.0821154570532092,0.0969890164884194,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0.271808412147228,0.313808538937,0.203996435272644,0,0,0,0,0,0.262887354279314,0,0,0,0.399358000997982,0.429226048136571,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0.137539436597234,0,0.674921674654501,3.0952078182318,0,0.33543468759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| |||
|short_description=p@chr1:151955393..151955422,+ | |||
}} |
Latest revision as of 21:29, 27 July 2015
Short description: | p@chr1:151955393..151955422, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:151955393..151955422, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 4.93e-16 | 3 |
classical monocyte | 1.25e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.25e-09 | 42 |
defensive cell | 3.31e-08 | 48 |
phagocyte | 3.31e-08 | 48 |
synovial cell | 8.17e-08 | 3 |
fibrocyte | 1.03e-07 | 3 |
tendon cell | 1.03e-07 | 3 |
macrophage dendritic cell progenitor | 2.34e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
placenta | 3.77e-12 | 4 |
allantois | 3.77e-12 | 4 |
chorion | 4.71e-12 | 7 |
mixed ectoderm/mesoderm/endoderm-derived structure | 2.54e-10 | 2 |
developing epithelial placode | 2.54e-10 | 2 |
respiratory system arterial blood vessel | 2.54e-10 | 2 |
respiratory system blood vessel | 2.54e-10 | 2 |
respiratory system artery | 2.54e-10 | 2 |
head blood vessel | 2.54e-10 | 2 |
pulmonary artery | 2.54e-10 | 2 |
pulmonary vascular system | 2.54e-10 | 2 |
pharyngeal vasculature | 2.54e-10 | 2 |
truncus arteriosus | 2.54e-10 | 2 |
aortic sac | 2.54e-10 | 2 |
pharyngeal arch artery | 2.54e-10 | 2 |
extraembryonic membrane | 4.08e-09 | 14 |
membranous layer | 4.08e-09 | 14 |
stratified squamous epithelium | 8.17e-08 | 3 |
layer of synovial tissue | 8.17e-08 | 3 |
synovial joint | 8.17e-08 | 3 |
synovial membrane of synovial joint | 8.17e-08 | 3 |
dense regular connective tissue | 1.03e-07 | 3 |
tendon | 1.03e-07 | 3 |
regular connective tissue | 1.03e-07 | 3 |
extraembryonic structure | 2.98e-07 | 24 |
outflow tract | 3.68e-07 | 3 |
lateral plate mesoderm | 8.91e-07 | 203 |