FFCP PHASE1:Hg19::chr1:153963227..153963249,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6232 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10416 | |||
|TSSclassifier=strong | |||
|UniProt=P42677,Q5T4L4,Q5T4L6 | |||
|association_with_transcript=0bp_to_ENST00000368567,ENST00000392558,ENST00000477151,ENST00000493224,NM_001030,uc001fdv.2_5end | |||
|cluster_id=chr1:153963227..153963249,+ | |||
|coexpression_cluster_id=C527 | |||
|description=CAGE_peak_1_at_RPS27_5end | |||
|id=chr1:153963227..153963249,+ | |||
|ontology_enrichment_celltype=CL:0002087!3.89e-21!119;CL:0002031!2.87e-18!124;CL:0000542!4.71e-17!53;CL:0000051!4.71e-17!53;CL:0000838!5.11e-17!52;CL:0000037!1.45e-16!172;CL:0000566!1.45e-16!172;CL:0000738!2.06e-16!140;CL:0000988!6.58e-16!182;CL:0002032!7.59e-15!165;CL:0000837!7.59e-15!165;CL:0002057!1.91e-12!42;CL:0000791!5.80e-12!18;CL:0000789!5.80e-12!18;CL:0002420!5.80e-12!18;CL:0002419!5.80e-12!18;CL:0000790!5.80e-12!18;CL:0000860!3.25e-11!45;CL:0000084!5.99e-11!25;CL:0000827!5.99e-11!25;CL:0002320!1.56e-09!365;CL:0000003!5.85e-09!722;CL:0000134!1.14e-08!358;CL:0000236!3.14e-08!14;CL:0000625!5.12e-08!11;CL:0000219!1.13e-07!390;CL:0000048!9.65e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.80e-12;18!CL:0000789;5.80e-12;18!CL:0002419;5.80e-12;18!CL:0000084;5.95e-11;25!CL:0000542;6.16e-11;53!CL:0000860;1.91e-09;33!CL:0002057;1.91e-09;33!CL:0002087;1.46e-08;104!CL:0000236;2.22e-08;13!CL:0000625;5.12e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,5.91e-22,115;CL:0002031,5.89e-19,120;CL:0000542,4.71e-17,53;CL:0000051,4.71e-17,53;CL:0000037,5.04e-17,168;CL:0000838,5.11e-17,52;CL:0000738,5.73e-17,136;CL:0000988,3.63e-16,177;CL:0002032,2.80e-15,161;CL:0000837,2.80e-15,161;CL:0000860,1.91e-12,42;CL:0002057,1.91e-12,42;CL:0000791,5.80e-12,18;CL:0000789,5.80e-12,18;CL:0002420,5.80e-12,18;CL:0002419,5.80e-12,18;CL:0000790,5.80e-12,18;CL:0000084,5.99e-11,25;CL:0000827,5.99e-11,25;CL:0002320,1.20e-09,361;CL:0000473,1.47e-09,48;CL:0000234,1.47e-09,48;CL:0000134,8.82e-09,354;CL:0000236,3.14e-08,14;CL:0000625,5.12e-08,11;CL:0000219,9.12e-08,386;CL:0000048,8.06e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000790;5.80e-12;18!CL:0000051;6.16e-11;53!CL:0002057;2.03e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!6.47e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.96e-10,371 | |||
|phase1_expression=271.427498630212,406.790995392868,203.538159514582,1268.92942311769,1451.72963469983,1871.16613419529,1091.72247490542,414.408236968001,920.679339404431,432.737462179157,1823.35445191195,500.230742178094,839.042757744711,402.611946179032,1341.4965769466,1478.44299704745,1296.9986243076,1381.01638092252,834.853018730557,545.42628728017,1329.67650553004,1230.93669124445,547.569443381711,354.231012088624,456.221952287513,421.649172917195,421.914929183271,407.800557986172,964.135842556664,778.789848739245,592.790936177255,1017.79929549817,655.424079261472,758.735228862248,820.377654145394,552.185298981145,1655.6128774092,624.906820823958,745.624255693987,1088.96054925214,422.080668942257,121.136231091098,200.136216051763,877.332972795893,959.804896969576,776.268995801012,1076.61129894713,1041.89942824731,1082.11405990749,1144.72802904984,1232.3891591115,892.483935599521,1274.86952736402,1178.65503222407,1231.02676314257,952.882722764665,1150.84523479394,1012.37929742511,1464.61142499477,1048.4751314576,1359.87006657456,986.585238858468,1063.73968609616,930.448630412871,1310.29471240806,1200.58713544645,1157.82656088277,958.764906619732,1100.85044078505,987.992054563576,754.327780281178,1148.28966900923,1225.97528894599,871.216800750448,875.079298656119,967.993966312172,458.3008150777,620.08039054258,310.843284672153,1312.76869767219,982.449468686306,1011.22875524101,1635.00511104569,2109.18731669435,2067.2195059789,2320.1322200941,2506.0784828584,1957.03205804502,1932.23416315015,2457.6424716831,2477.21484156432,3083.5824813868,3059.33264468621,1662.71531352415,1854.16232634292,1170.74225682522,1917.33012929953,1614.09520261082,2441.51780061917,1423.42582175623,3719.0989845559,4373.23738157173,4833.65113180028,959.80108606577,2421.66055944316,2318.79527460676,1837.6750195094,1458.83204035571,1514.28098363966,1997.59166512546,2305.31184836955,2004.27814094362,2567.43355458791,3230.2879583552,4252.50510838646,941.260709788682,3210.23807490329,2669.98525140003,2336.38383610809,2135.34397221442,3367.4036233454,2423.65271334335,2325.93386439436,2629.99687261214,1399.22413738627,1701.71811044035,1958.3902726567,1682.60987895362,1757.88440688499,2310.67336395006,60.9517165784904,755.879868885998,789.5513193838,810.346579646198,581.050638426996,682.951336900284,194.845057027519,612.673301711019,343.728595208551,494.013097546593,449.362763606033,184.484027838528,520.577966970043,673.715332539308,285.277159022467,143.831163009195,371.883415571266,1009.53081268451,858.564361080972,1212.06582683837,212.477013475008,441.300347289442,263.132500218556,124.933055165206,445.92790069113,183.503733974025,245.778080647289,247.304838525048,61.9033297074876,94.0564921868723,539.388455609148,305.629386498842,612.595764445906,315.454922936755,520.921272487971,137.789480742335,295.031595630787,260.470354357924,308.166441306425,58.854470893224,283.046694372479,169.996738492522,205.523539998612,644.983103118808,854.791756915948,296.442027806781,79.3130993071181,237.500721980018,461.068896857864,553.388791340457,245.522690178321,469.90167973469,97.0978430447271,762.597114586504,804.232563318217,553.968185180449,594.037378138879,298.759825588091,807.245958683209,262.987509731991,699.718722343533,762.384765195322,816.001512559751,730.20374404499,369.519049971357,556.439457422309,555.376073819739,316.008760037026,526.431292434048,165.649367872721,772.514502452456,415.116857010727,318.551751594021,66.7724518316881,491.654935386538,594.892811645897,682.982215789389,302.069903755136,128.801758424603,579.594753253592,462.859272132483,199.860669992212,529.999157873291,146.855107826009,467.711659961285,78.6497708244301,497.805659368564,157.013807579839,167.530815528985,853.167887889689,195.965295069171,389.104603355147,410.506193983691,185.337158183602,129.008915039465,85.4677694259231,552.662862473197,282.553466061407,416.555285187223,489.798484947625,622.980180811927,728.494808715357,530.363914598076,413.603923258025,211.346429669295,1172.06465035272,1719.51692533695,795.140003067791,573.69370033578,667.359541747362,741.837260598082,616.163067893325,627.106246310628,923.324798280806,778.410552152248,768.724819578888,816.399932814861,796.573275203572,424.744379694005,1261.33474368795,162.246444571943,191.651307252137,363.335792609064,482.519167660213,345.597512306149,369.385495572726,163.418174973443,177.594770147039,505.359144313268,393.963834149543,422.247563682181,1219.84350313295,609.078263346653,462.214524635631,230.825492867625,206.877119641619,484.282846155135,617.374724001271,691.428848214366,787.231810640998,174.321640309877,76.5193947005307,234.539974091613,296.198915398215,295.816527758192,450.561259036304,308.797786279421,345.854386831615,320.124537102951,82.2747607286226,314.94924846531,329.237047478746,458.877931679605,284.55044494306,230.306862597697,139.425775328771,86.7409109354348,184.758241704522,410.281695886261,469.135856352199,452.177416421575,252.631333030098,913.772304274555,190.459528277007,284.91486153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| |||
|short_description=p1@RPS27 | |||
}} |
Latest revision as of 08:17, 17 September 2015
Short description: | p1@RPS27 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPS27_5end |
Coexpression cluster: | C527_CD4_CD8_CD19_CD34_CD133_skeletal_Mesenchymal |
Association with transcript: | 0bp_to_ENST00000368567, ENST00000392558, ENST00000477151, ENST00000493224, NM_001030, uc001fdv.2_5end |
EntrezGene: | RPS27 |
HGNC: | 10416 |
UniProt: | P42677Q5T4L4Q5T4L6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 5.91e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 5.89e-19 | 120 |
lymphocyte | 4.71e-17 | 53 |
common lymphoid progenitor | 4.71e-17 | 53 |
hematopoietic stem cell | 5.04e-17 | 168 |
lymphoid lineage restricted progenitor cell | 5.11e-17 | 52 |
leukocyte | 5.73e-17 | 136 |
hematopoietic cell | 3.63e-16 | 177 |
hematopoietic oligopotent progenitor cell | 2.80e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.80e-15 | 161 |
classical monocyte | 1.91e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.91e-12 | 42 |
mature alpha-beta T cell | 5.80e-12 | 18 |
alpha-beta T cell | 5.80e-12 | 18 |
immature T cell | 5.80e-12 | 18 |
mature T cell | 5.80e-12 | 18 |
immature alpha-beta T cell | 5.80e-12 | 18 |
T cell | 5.99e-11 | 25 |
pro-T cell | 5.99e-11 | 25 |
connective tissue cell | 1.20e-09 | 361 |
defensive cell | 1.47e-09 | 48 |
phagocyte | 1.47e-09 | 48 |
mesenchymal cell | 8.82e-09 | 354 |
B cell | 3.14e-08 | 14 |
CD8-positive, alpha-beta T cell | 5.12e-08 | 11 |
motile cell | 9.12e-08 | 386 |
multi fate stem cell | 8.06e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.96e-10 | 371 |