FFCP PHASE1:Hg19::chr1:207497946..207497958,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1604 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2665 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-44bp_to_ENST00000465534,ENST00000476590_5end | |||
|cluster_id=chr1:207497946..207497958,+ | |||
|coexpression_cluster_id=C531 | |||
|description=CAGE_peak_11_at_CD55_5end | |||
|id=chr1:207497946..207497958,+ | |||
|ontology_enrichment_celltype=CL:0000860!3.60e-17!45;CL:0002057!6.17e-15!42;CL:0000766!1.14e-09!76;CL:0000839!2.94e-08!70;CL:0002009!3.10e-08!65;CL:0002194!3.67e-08!63;CL:0000576!3.67e-08!63;CL:0000040!3.67e-08!63;CL:0000559!3.67e-08!63;CL:0000557!4.24e-08!71;CL:0000763!6.01e-07!112;CL:0000049!6.01e-07!112;CL:0000738!6.92e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.18e-17;33!CL:0002057;3.18e-17;33!CL:0000473;1.16e-12;39!CL:0000234;1.16e-12;39!CL:0000775;6.02e-12;3!CL:0000094;1.18e-07;8!CL:0000576;1.31e-07;48!CL:0000766;4.15e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.48e-14,42;CL:0002057,2.48e-14,42;CL:0000766,3.14e-12,72;CL:0000473,3.99e-12,48;CL:0000234,3.99e-12,48;CL:0000775,4.76e-12,3;CL:0002194,4.69e-09,59;CL:0000576,4.69e-09,59;CL:0000040,4.69e-09,59;CL:0000559,4.69e-09,59;CL:0002009,1.16e-08,61;CL:0000839,8.75e-08,66;CL:0000094,1.05e-07,8;CL:0000557,1.26e-07,67;CL:0000763,8.30e-07,108;CL:0000049,8.30e-07,108 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.72e-13;29!CL:0002057;1.38e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.01e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.45e-31;9!UBERON:0001557;4.45e-31;9!UBERON:0000065;1.21e-07;44!UBERON:0000072;1.87e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.01e-31,9;UBERON:0001557,5.66e-14,19;UBERON:0008947,1.97e-09,38;UBERON:0003258,1.97e-09,38 | |||
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| |||
|short_description=p11@CD55 | |||
}} |
Latest revision as of 07:44, 20 September 2015
Short description: | p11@CD55 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CD55_5end |
Coexpression cluster: | C531_Neutrophils_Eosinophils_large_CD14_rectal_epitheloid_Hep2 |
Association with transcript: | -44bp_to_ENST00000465534, ENST00000476590_5end |
EntrezGene: | CD55 |
HGNC: | 2665 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.48e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.48e-14 | 42 |
myeloid leukocyte | 3.14e-12 | 72 |
defensive cell | 3.99e-12 | 48 |
phagocyte | 3.99e-12 | 48 |
neutrophil | 4.76e-12 | 3 |
monopoietic cell | 4.69e-09 | 59 |
monocyte | 4.69e-09 | 59 |
monoblast | 4.69e-09 | 59 |
promonocyte | 4.69e-09 | 59 |
macrophage dendritic cell progenitor | 1.16e-08 | 61 |
myeloid lineage restricted progenitor cell | 8.75e-08 | 66 |
granulocyte | 1.05e-07 | 8 |
granulocyte monocyte progenitor cell | 1.26e-07 | 67 |
myeloid cell | 8.30e-07 | 108 |
common myeloid progenitor | 8.30e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.01e-31 | 9 |
upper respiratory tract | 5.66e-14 | 19 |
respiratory primordium | 1.97e-09 | 38 |
endoderm of foregut | 1.97e-09 | 38 |