FFCP PHASE1:Hg19::chr1:21996297..21996310,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5909 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9858 | |||
|TSSclassifier=strong | |||
|UniProt=P47736 | |||
|association_with_transcript=-441bp_to_ENST00000542643,NM_001145657,NM_002885,uc001bex.2,uc001bey.2_5end | |||
|cluster_id=chr1:21996297..21996310,- | |||
|coexpression_cluster_id=C1453 | |||
|description=CAGE_peak_9_at_RAP1GAP_5end | |||
|id=chr1:21996297..21996310,- | |||
|ontology_enrichment_celltype=CL:0000181!1.24e-13!12;CL:0000417!1.24e-13!12;CL:0000668!1.24e-13!12;CL:0000414!1.24e-13!12;CL:0000412!1.24e-13!12;CL:0000182!1.24e-13!12;CL:0000840!2.10e-07!5;CL:0001029!2.10e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000182;7.13e-46;12!CL:0002535;1.56e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.20e-46,12;CL:0002535,1.48e-12,2;CL:0000223,1.08e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.34e-50;11!UBERON:0009497;2.22e-42;13!UBERON:0001041;1.43e-18;30!UBERON:0003104;6.24e-18;31!CL:0000223;8.32e-07;58 | |||
|ontology_enrichment_disease=DOID:3493!1.81e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:7;6.31e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,1.78e-09,39;DOID:305,1.65e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0002107!1.27e-14!19;UBERON:0006925!1.27e-14!19;UBERON:0008836!1.27e-14!19;UBERON:0009497!1.95e-13!25;UBERON:0000015!1.95e-13!25;UBERON:0002423!1.95e-13!25;UBERON:0006235!1.95e-13!25;UBERON:0004161!1.95e-13!25;UBERON:0008835!1.93e-12!22;UBERON:0003894!1.93e-12!22;UBERON:0009854!7.68e-12!23;UBERON:0007499!8.75e-11!25;UBERON:0002365!1.60e-10!31;UBERON:0002330!1.60e-10!31;UBERON:0005057!2.57e-10!26;UBERON:0009856!2.57e-10!26;UBERON:0005172!2.15e-09!55;UBERON:0005173!2.15e-09!55;UBERON:0002368!3.54e-09!35;UBERON:0002417!3.14e-08!61;UBERON:0000916!3.14e-08!61;UBERON:0003929!4.83e-08!54;UBERON:0000949!8.83e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.62e-41;19!UBERON:0006925;1.62e-41;19!UBERON:0002423;1.29e-31;25!UBERON:0002365;5.09e-24;31!UBERON:0002330;5.09e-24;31!UBERON:0002368;3.07e-23;33!UBERON:0000949;2.63e-15;43!UBERON:0006955;1.56e-12;2!UBERON:0004801;1.56e-12;2!UBERON:0002417;5.24e-11;58!UBERON:0000916;5.24e-11;58!UBERON:0002530;1.17e-09;57!UBERON:0005172;1.66e-09;52!UBERON:0005173;1.66e-09;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.68e-41,19;UBERON:0006925,1.68e-41,19;UBERON:0008836,1.68e-41,19;UBERON:0008835,7.03e-36,22;UBERON:0003894,7.03e-36,22;UBERON:0009854,2.49e-34,23;UBERON:0007499,1.33e-31,25;UBERON:0009497,1.33e-31,25;UBERON:0000015,1.33e-31,25;UBERON:0002423,1.33e-31,25;UBERON:0006235,1.33e-31,25;UBERON:0004161,1.33e-31,25;UBERON:0009856,2.14e-30,26;UBERON:0002365,1.59e-25,31;UBERON:0002330,1.59e-25,31;UBERON:0002368,1.26e-22,35;UBERON:0000949,1.26e-17,45;UBERON:0003929,1.06e-14,54;UBERON:0005172,1.06e-14,54;UBERON:0005173,1.06e-14,54;UBERON:0002530,1.85e-13,59;UBERON:0002417,3.10e-13,60;UBERON:0000916,3.10e-13,60;UBERON:0006955,1.48e-12,2;UBERON:0004801,1.48e-12,2;UBERON:0005911,1.11e-09,82;UBERON:0001041,4.02e-09,87;UBERON:0005177,7.57e-08,101;UBERON:0009569,4.57e-07,112;UBERON:0003914,9.28e-07,117 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,1.0447784237956,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0.328014645699706,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.77899121781414,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0.344743373241465,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0.0801588202515337,0,0,0.144090417154106,0,1.88754497648161,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,1.16495949527454,2.6786281984456,3.29663433524666,2.35912403489647,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0.551639951094387,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0.12729431655633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@RAP1GAP | |||
}} |
Latest revision as of 06:08, 25 September 2015
Short description: | p9@RAP1GAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RAP1GAP_5end |
Coexpression cluster: | C1453_argyrophil_hepatocellular_Intestinal_small_liver_hepatoblastoma_gastrointestinal |
Association with transcript: | -441bp_to_ENST00000542643, NM_001145657, NM_002885, uc001bex.2, uc001bey.2_5end |
EntrezGene: | RAP1GAP |
HGNC: | 9858 |
UniProt: | P47736 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.20e-46 | 12 |
epithelial cell of cervix | 1.48e-12 | 2 |
endodermal cell | 1.08e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 1.68e-41 | 19 |
digestive gland | 1.68e-41 | 19 |
liver bud | 1.68e-41 | 19 |
hepatic diverticulum | 7.03e-36 | 22 |
liver primordium | 7.03e-36 | 22 |
digestive tract diverticulum | 2.49e-34 | 23 |
epithelial sac | 1.33e-31 | 25 |
epithelium of foregut-midgut junction | 1.33e-31 | 25 |
anatomical boundary | 1.33e-31 | 25 |
hepatobiliary system | 1.33e-31 | 25 |
foregut-midgut junction | 1.33e-31 | 25 |
septum transversum | 1.33e-31 | 25 |
sac | 2.14e-30 | 26 |
exocrine gland | 1.59e-25 | 31 |
exocrine system | 1.59e-25 | 31 |
endocrine gland | 1.26e-22 | 35 |
endocrine system | 1.26e-17 | 45 |
gut epithelium | 1.06e-14 | 54 |
abdomen element | 1.06e-14 | 54 |
abdominal segment element | 1.06e-14 | 54 |
gland | 1.85e-13 | 59 |
abdominal segment of trunk | 3.10e-13 | 60 |
abdomen | 3.10e-13 | 60 |
uterine epithelium | 1.48e-12 | 2 |
cervix epithelium | 1.48e-12 | 2 |
endo-epithelium | 1.11e-09 | 82 |
foregut | 4.02e-09 | 87 |
trunk region element | 7.57e-08 | 101 |
subdivision of trunk | 4.57e-07 | 112 |
epithelial tube | 9.28e-07 | 117 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 1.78e-09 | 39 |
carcinoma | 1.65e-07 | 106 |