FFCP PHASE1:Hg19::chr1:32716592..32716596,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3932 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6524 | |||
|TSSclassifier=strong | |||
|UniProt=P06239 | |||
|association_with_transcript=-243bp_to_ENST00000336890,NM_005356,uc001bux.2_5end | |||
|cluster_id=chr1:32716592..32716596,+ | |||
|coexpression_cluster_id=C1218 | |||
|description=CAGE_peak_5_at_LCK_5end | |||
|id=chr1:32716592..32716596,+ | |||
|ontology_enrichment_celltype=CL:0000542!5.52e-27!53;CL:0000051!5.52e-27!53;CL:0000838!3.25e-26!52;CL:0000945!9.21e-16!24;CL:0000826!9.21e-16!24;CL:0000084!5.26e-10!25;CL:0000827!5.26e-10!25;CL:0000236!1.42e-09!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.41e-28;24!CL:0000542;7.32e-22;53!CL:0000236;5.44e-18;13!CL:0000084;9.75e-11;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.58e-33,52;CL:0000542,8.80e-33,53;CL:0000051,8.80e-33,53;CL:0000945,1.44e-28,24;CL:0000826,1.44e-28,24;CL:0000236,3.40e-21,14;CL:0000817,4.53e-13,3;CL:0000738,2.30e-12,136;CL:0002087,8.32e-12,115;CL:0000037,8.74e-12,168;CL:0002031,4.34e-11,120;CL:0000988,7.71e-11,177;CL:0000084,8.06e-11,25;CL:0000827,8.06e-11,25;CL:0000785,2.83e-09,2;CL:0000955,2.83e-09,2;CL:0000818,2.83e-09,2;CL:0000954,2.83e-09,2;CL:0000816,2.83e-09,2;CL:0002032,1.24e-08,161;CL:0000837,1.24e-08,161 | |||
|ontology_enrichment_development_v019=CL:0000051;7.32e-22;53!CL:0000954;2.81e-09;2 | |||
|ontology_enrichment_disease=DOID:162!1.92e-12!235;DOID:14566!2.39e-12!239;DOID:0050686!8.26e-09!137;DOID:2531!8.38e-08!51;DOID:0060083!8.38e-08!51;DOID:0060058!1.28e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;9.61e-14;10!DOID:2531;9.46e-08;51!DOID:0060083;9.46e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,8.39e-14,10;DOID:2531,1.01e-11,51;DOID:0060083,1.01e-11,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p5@LCK | |||
}} |
Latest revision as of 14:55, 17 September 2015
Short description: | p5@LCK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LCK_5end |
Coexpression cluster: | C1218_hairy_plasma_lymphoma_xeroderma_hereditary_mycosis_splenic |
Association with transcript: | -243bp_to_ENST00000336890, NM_005356, uc001bux.2_5end |
EntrezGene: | LCK |
HGNC: | 6524 |
UniProt: | P06239 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.58e-33 | 52 |
lymphocyte | 8.80e-33 | 53 |
common lymphoid progenitor | 8.80e-33 | 53 |
lymphocyte of B lineage | 1.44e-28 | 24 |
pro-B cell | 1.44e-28 | 24 |
B cell | 3.40e-21 | 14 |
precursor B cell | 4.53e-13 | 3 |
leukocyte | 2.30e-12 | 136 |
nongranular leukocyte | 8.32e-12 | 115 |
hematopoietic stem cell | 8.74e-12 | 168 |
hematopoietic lineage restricted progenitor cell | 4.34e-11 | 120 |
hematopoietic cell | 7.71e-11 | 177 |
T cell | 8.06e-11 | 25 |
pro-T cell | 8.06e-11 | 25 |
mature B cell | 2.83e-09 | 2 |
pre-B-II cell | 2.83e-09 | 2 |
transitional stage B cell | 2.83e-09 | 2 |
small pre-B-II cell | 2.83e-09 | 2 |
immature B cell | 2.83e-09 | 2 |
hematopoietic oligopotent progenitor cell | 1.24e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.24e-08 | 161 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 8.39e-14 | 10 |
hematologic cancer | 1.01e-11 | 51 |
immune system cancer | 1.01e-11 | 51 |