FFCP PHASE1:Hg19::chr20:10654253..10654271,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=182 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6188 | |||
|TSSclassifier=strong | |||
|UniProt=P78504 | |||
|association_with_transcript=336bp_to_ENST00000254958_5end | |||
|cluster_id=chr20:10654253..10654271,- | |||
|description=CAGE_peak_4_at_JAG1_5end | |||
|id=chr20:10654253..10654271,- | |||
|ontology_enrichment_celltype=CL:0000047!4.10e-08!8;CL:0002076!1.11e-07!43;CL:0000066!2.22e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.15e-19;6!CL:0000404;2.15e-19;6!CL:0002319;3.43e-18;25!CL:0002322;1.73e-16;5!CL:0002605;1.96e-11;3!CL:0002621;8.65e-11;3!CL:0002166;2.87e-10;3!CL:0000128;2.50e-08;7!CL:0000126;2.50e-08;7!CL:0000127;2.50e-08;7!CL:0000047;4.05e-08;2!CL:0000039;7.19e-08;7!CL:0000586;7.19e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.02e-25,8;CL:0000540,2.57e-19,6;CL:0000031,2.57e-19,6;CL:0000404,2.57e-19,6;CL:0002319,3.42e-18,25;CL:0002322,1.79e-16,5;CL:0000221,1.01e-15,72;CL:0000133,1.58e-11,59;CL:0002605,1.90e-11,3;CL:0002621,7.98e-11,3;CL:0002166,2.74e-10,3;CL:0000128,2.43e-08,7;CL:0000126,2.43e-08,7;CL:0000127,2.43e-08,7;CL:0002453,2.43e-08,7;CL:0002321,2.44e-08,250;CL:0000039,8.38e-08,7;CL:0000586,8.38e-08,7 | |||
|ontology_enrichment_development_v019=CL:0000031;2.15e-19;6!CL:0000133;8.90e-09;59!UBERON:0009117;2.51e-08;10!UBERON:0005564;2.51e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.17e-13!82;UBERON:0005743!3.40e-12!86;UBERON:0001893!1.73e-09!34;UBERON:0000073!2.50e-09!94;UBERON:0001016!2.50e-09!94;UBERON:0001049!2.56e-09!57;UBERON:0005068!2.56e-09!57;UBERON:0006241!2.56e-09!57;UBERON:0007135!2.56e-09!57;UBERON:0002791!2.96e-09!33;UBERON:0001869!5.28e-09!32;UBERON:0002020!7.69e-09!34;UBERON:0003528!7.69e-09!34;UBERON:0002780!1.17e-08!41;UBERON:0001890!1.17e-08!41;UBERON:0006240!1.17e-08!41;UBERON:0003080!3.23e-08!42;UBERON:0002616!5.48e-08!59;UBERON:0000956!6.43e-08!25;UBERON:0000203!6.43e-08!25;UBERON:0000955!7.27e-08!69;UBERON:0006238!7.27e-08!69;UBERON:0000468!1.18e-07!659;UBERON:0003075!2.75e-07!86;UBERON:0007284!2.75e-07!86;UBERON:0000922!4.47e-07!612;UBERON:0000467!4.84e-07!625;UBERON:0000480!6.23e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;8.65e-11;3!UBERON:0000922;4.45e-08;49!UBERON:0001708;8.43e-08;4!UBERON:0008895;8.43e-08;4!UBERON:0000473;7.01e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,7.98e-11,3;UBERON:0001708,8.15e-08,4;UBERON:0008895,8.15e-08,4;UBERON:0001017,2.09e-07,81;UBERON:0000473,8.01e-07,8 | |||
|phase1_expression=0.181678379270557,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0.123121058076788,0,0,23.4713509447466,5.74872585306114,17.3248842640828,0,0,0,0.393364276848904,0.383829398097213,0.309632246632152,0,0.90361775633475,0.369754010166788,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0.236482229888585,0,0,0,0,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0,0,0,0.316462387440884,0,0,0,0,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,0.50133791063589,0.289693037921647,0,0,0.378139268656271,0,0.175669571386252,0,0.728590576585084,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0,0.626984899610432,0,0.71153252537342,0.33472061276467,0.805658634218294,0,0.732186172644509,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.397227542439656,0.286836620748814,0,0,1.06748995729705,0.24666754841716,0,0.404132016209064,0,0.454072282934794,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.358779271377724,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0.18611685633159,0,0,0,0.0920498986422993,0.161646056818812,0,0,0.169560592310488,4.05847791642923,3.81844568827169,4.30206893083506,3.17131635936948,5.16866096453793,3.95059405756363,2.38420426535352,3.28017106138317,4.01475094983413,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,1.4763109092493,0,0,0,0,0,0,0,0.245976877086227,0,1.97550513735526,0,0.201057944823262,0,0,0,0,2.78232971940184,0.352226082707465,0.866198686566443,0,0.570762456703795,0.790204397959275,0,0,0,0,3.74935335947108,2.51973192298289,2.1266264586358,0.0895585227028483,0.290633938513962,0,0,0,0,0.288239906833923,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0,0,0.43596006883328,0.1466765716419,0.258543431515556,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,7.18874566474748,0,0,0,0,0,0,0.197030760201927,0,0,13.9752043322355,6.50699269288109,3.86644406388848,4.69045542936177,8.29320377149112,0,0,0.414415513436035,0,0,0,0.623912584592421,0,0.157702415033935,0,0,2.27407504055985,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0.241718899183244,6.01519410909855,0.460404944679482,0,0,0.524497659837696,0,0,0,0,0.105551628892876,1.13733384070897,0.340187410553031,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0.650060246036521,0,0,0.154048617114644,0,0,0,0,0,0,2.47927373041467,0.960950336825531,1.27612712494584,0.6069466851333,0,0,0,0.308033580176089,0.532306030317022,0,0.74129687641568,2.00374841438788,0,0,0,0,0,0,0,0,0,0,0.606547444719948,0,0,0,0.487426979262569,0,0,0.141405431953713,0,0,0,1.75380354101505,0,0,0.608731130888112,0.6196469961995,0.281695602532241,0,0.196498082026242,0.35667105148125,0,0,0.329294892959902,0,0.349934720244983,0.962221127255121,0,2.17781969722645,0.188287601553558,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0.371606350251437,0,0,0,0.199579371432817,0,0,0.324621940274555,0,0.456469358066384,0.47003968731907,0,0.169291777801603,0,0.201799707191048,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0.37428108081644,0.293016358543788,12.5001337401999,0.111443384277478,0,0,0.296964680832639,0,0.994147647766298,0,0.333926115068718,0,0.211125408127993,0.19924798825107,0.276283915531148,0,7.97695723516807,0,0.622079175323615,0.449341755736634,0.179021174675609,0,0,0,0,0,0.371072392647405,1.99613798001194,0,0,0,0.682760689712998,0,0.236387681767936,0,0,0.173624994933292,0.885741385813839,0.844175070377856,0,0.552896299656123,0.295547618953547,0.658156191461918,0,0.139423744278603,0.230850775511391,0.569710279235006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0.216388639742091,0,0.176915129006678,0.611030144933625,0.296521128680622,0.123563938946503,0,0.269604531922708,0.802577647298789,0.937057782901357,0,0.391329237864179,0,0,0,5.50930970934882,0.31593289814244,2.40517471063188,0.311064574191741,0.664653872707185,0,0,0,1.13843818411917,0.554698692052555,0.347119476670262,0.391969589657511,0.435296032902013,0.52418000472609,0,0,0.0730893170861856,0,0.193978032976839,0,0.451961481561065,0.274083849293502,0,0.126621591911757,0.195551382734803,0,0.213452994739353,0,0.288180834308212,4.23785405813888,0,0,0.124252535565433,0,0,0,0.101998217636322,0,0,0.410716136675979,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,2.32991899054908,0,0.0824158583811665,0,0,0.0846733320657845,0,0.953423842781029,1.12527203925513,3.16340704173638,3.32352270423348,0.674921674654501,2.32140586367385,0.546746009922222,0.335434687599266,0.0788057072991982,0.419636705079985,0.422401346077626,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0.146552233678082,0,0,0.39669780522807,0.171086837884329,0,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| |||
|short_description=p4@JAG1 | |||
}} |
Latest revision as of 03:24, 20 September 2015
Short description: | p4@JAG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_JAG1_5end |
Coexpression cluster: | NA |
Association with transcript: | 336bp_to_ENST00000254958_5end |
EntrezGene: | JAG1 |
HGNC: | 6188 |
UniProt: | P78504 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.02e-25 | 8 |
neuron | 2.57e-19 | 6 |
neuroblast | 2.57e-19 | 6 |
electrically signaling cell | 2.57e-19 | 6 |
neural cell | 3.42e-18 | 25 |
embryonic stem cell | 1.79e-16 | 5 |
ectodermal cell | 1.01e-15 | 72 |
neurectodermal cell | 1.58e-11 | 59 |
astrocyte of the cerebral cortex | 1.90e-11 | 3 |
gingival epithelial cell | 7.98e-11 | 3 |
epithelial cell of Malassez | 2.74e-10 | 3 |
oligodendrocyte | 2.43e-08 | 7 |
macroglial cell | 2.43e-08 | 7 |
astrocyte | 2.43e-08 | 7 |
oligodendrocyte precursor cell | 2.43e-08 | 7 |
embryonic cell | 2.44e-08 | 250 |
germ line cell | 8.38e-08 | 7 |
germ cell | 8.38e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 7.98e-11 | 3 |
jaw skeleton | 8.15e-08 | 4 |
splanchnocranium | 8.15e-08 | 4 |
central nervous system | 2.09e-07 | 81 |
testis | 8.01e-07 | 8 |