FFCP PHASE1:Hg19::chr9:118701892..118701903,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:118701892..118701903,+
|short_description=p@chr9:118701892..118701903,+
|description=CAGE_peak_at_chr9:118701892..118701903,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:118701892..118701903,+ | |||
|coexpression_cluster_id=C679 | |||
|description=CAGE_peak_at_chr9:118701892..118701903,+ | |||
|id=chr9:118701892..118701903,+ | |||
|ontology_enrichment_celltype=CL:0000187!3.37e-21!54;CL:0000680!7.23e-21!57;CL:0000056!7.23e-21!57;CL:0000355!7.23e-21!57;CL:0000183!7.23e-20!59;CL:0000393!4.42e-18!60;CL:0000211!4.42e-18!60;CL:0000055!4.61e-17!180;CL:0000192!9.58e-17!42;CL:0000514!9.58e-17!42;CL:0000222!4.53e-14!119;CL:0000359!3.74e-12!32;CL:0000057!2.63e-09!75;CL:0000548!1.06e-08!679;CL:0000004!1.06e-08!679;CL:0000255!1.06e-08!679;CL:0000144!1.51e-08!625;CL:0000012!1.62e-08!682;CL:0002494!1.18e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002504;3.08e-19;3!CL:1000279;3.08e-19;3!CL:1000280;3.08e-19;3!CL:0002195;4.23e-14;2!CL:0002571;4.23e-14;2!CL:0000594;2.63e-09;3!CL:0000342;2.13e-07;1!CL:0002550;2.13e-07;1!CL:0002557;2.13e-07;1!CL:0002565;2.13e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002504,6.54e-20,3;CL:1000279,6.54e-20,3;CL:1000280,6.54e-20,3;CL:0002195,4.27e-14,2;CL:0002571,4.27e-14,2;CL:0000594,1.98e-09,3;CL:0000187,9.70e-08,55;CL:0002557,9.71e-08,1;CL:0000342,1.83e-07,1;CL:0002565,1.83e-07,1;CL:0000680,2.90e-07,58;CL:0000056,2.90e-07,58;CL:0000355,2.90e-07,58;CL:0002550,3.20e-07,1;CL:0000393,7.77e-07,61;CL:0000211,7.77e-07,61 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.13e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.84e-19!83;UBERON:0002329!1.84e-19!83;UBERON:0003077!1.84e-19!83;UBERON:0003059!1.84e-19!83;UBERON:0007282!1.84e-19!83;UBERON:0009618!1.84e-19!83;UBERON:0007285!1.84e-19!83;UBERON:0001134!7.94e-19!61;UBERON:0002036!7.94e-19!61;UBERON:0003082!7.94e-19!61;UBERON:0004290!1.17e-18!70;UBERON:0002385!6.59e-18!63;UBERON:0001015!6.59e-18!63;UBERON:0000383!6.59e-18!63;UBERON:0000486!2.17e-15!82;UBERON:0005256!1.42e-14!143;UBERON:0002200!7.73e-11!11;UBERON:0006876!7.73e-11!11;UBERON:0000490!2.34e-10!138;UBERON:0004535!9.41e-10!110;UBERON:0002049!1.77e-09!79;UBERON:0007798!1.77e-09!79;UBERON:0001009!3.11e-09!113;UBERON:0004872!5.02e-09!84;UBERON:0002100!1.03e-08!216;UBERON:0000481!1.26e-08!347;UBERON:0003104!1.52e-08!238;UBERON:0009142!1.52e-08!238;UBERON:0005284!1.62e-08!5;UBERON:0001637!2.24e-07!42;UBERON:0003509!2.24e-07!42;UBERON:0004572!2.24e-07!42;UBERON:0000483!2.57e-07!309;UBERON:0000119!4.32e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0006876;5.26e-09;11!UBERON:0002506;2.13e-07;1!UBERON:0001769;2.13e-07;1!UBERON:0001987;5.53e-07;4!UBERON:0001155;9.92e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006876,5.63e-09,11;UBERON:0002506,1.83e-07,1;UBERON:0001769,1.83e-07,1;UBERON:0001987,4.22e-07,4;UBERON:0004340,4.22e-07,4;UBERON:0001155,6.05e-07,9 | |||
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| ||
|short_description=p@chr9:118701892..118701903,+ | |||
}} | }} |
Latest revision as of 22:10, 31 July 2015
Short description: | p@chr9:118701892..118701903, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:118701892..118701903, + |
Coexpression cluster: | C679_Mesenchymal_Smooth_Cardiac_Hair_Fibroblast_Mesothelial_Skeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 6.54e-20 | 3 |
smooth muscle cell of large intestine | 6.54e-20 | 3 |
smooth muscle cell of colon | 6.54e-20 | 3 |
hepatic stem cell | 4.27e-14 | 2 |
hepatic mesenchymal stem cell | 4.27e-14 | 2 |
skeletal muscle satellite cell | 1.98e-09 | 3 |
muscle cell | 9.70e-08 | 55 |
fibroblast of pulmonary artery | 9.71e-08 | 1 |
pigment cell (sensu Vertebrata) | 1.83e-07 | 1 |
iris pigment epithelial cell | 1.83e-07 | 1 |
muscle precursor cell | 2.90e-07 | 58 |
myoblast | 2.90e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.90e-07 | 58 |
fibroblast of the conjuctiva | 3.20e-07 | 1 |
electrically responsive cell | 7.77e-07 | 61 |
electrically active cell | 7.77e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
vasculature of organ | 5.63e-09 | 11 |
iris epithelium | 1.83e-07 | 1 |
iris | 1.83e-07 | 1 |
placenta | 4.22e-07 | 4 |
allantois | 4.22e-07 | 4 |
colon | 6.05e-07 | 9 |