FFCP PHASE1:Hg19::chr20:44640603..44640610,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4318 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7176 | |||
|TSSclassifier=strong | |||
|UniProt=F5H3W7 | |||
|association_with_transcript=49bp_to_ENST00000545925_5end | |||
|cluster_id=chr20:44640603..44640610,+ | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_8_at_MMP9_5end | |||
|id=chr20:44640603..44640610,+ | |||
|ontology_enrichment_celltype=CL:0000453!9.13e-20!5;CL:0002322!7.69e-19!5;CL:0000990!3.57e-15!8;CL:0002009!1.65e-12!65;CL:0000451!2.79e-12!10;CL:0000557!3.97e-11!71;CL:0002194!9.89e-10!63;CL:0000576!9.89e-10!63;CL:0000040!9.89e-10!63;CL:0000559!9.89e-10!63;CL:0000763!1.30e-09!112;CL:0000049!1.30e-09!112;CL:0001014!3.24e-09!2;CL:0001016!3.24e-09!2;CL:0000766!1.01e-08!76;CL:0000839!1.94e-08!70;CL:0000738!1.47e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0001014;5.68e-99;2!CL:0001016;5.68e-99;2!CL:0000453;1.81e-40;5!CL:0000840;5.98e-34;5!CL:0000990;4.59e-23;8!CL:0000451;4.28e-19;10!CL:0000244;1.21e-13;4!CL:0000731;1.21e-13;4!CL:0000235;1.50e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,5.68e-99,2;CL:0001016,5.68e-99,2;CL:0000453,1.81e-40,5;CL:0000840,5.98e-34,5;CL:0001029,5.98e-34,5;CL:0000990,4.59e-23,8;CL:0000451,4.28e-19,10;CL:0000244,1.13e-13,4;CL:0000731,1.13e-13,4;CL:0000235,1.57e-09,6;CL:0002009,4.39e-08,61;CL:0000557,1.92e-07,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.91e-09!80;UBERON:0001474!1.59e-08!86;UBERON:0002390!1.65e-08!102;UBERON:0003061!1.65e-08!102;UBERON:0004765!1.20e-07!101;UBERON:0001434!1.20e-07!101;UBERON:0002193!2.24e-07!112;UBERON:0002405!4.46e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;3.42e-11;5!UBERON:0005910;1.50e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,3.26e-11,5;UBERON:0005910,1.44e-09,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0.217010870715852,0.223915474239924,0,0,0,0.377875943688809,0,0.232429036905685,0,0.309706370895104,0,0,0,0,0,0,0.564727018627814,0.818718450173537,0,0,0.320929027076094,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.731842236777572,0.265059536642971,0.348581828608555,0.725627385107593,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0.984868024349589,0.702012795417713,0.445893486866185,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,1.68471475667626,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,11.698642360678,2.32140586367385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.930053882193542,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989464650708862,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.305966489225945,0,0.827054095813604,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@MMP9 | |||
}} |
Latest revision as of 14:02, 16 September 2015
Short description: | p8@MMP9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_MMP9_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | 49bp_to_ENST00000545925_5end |
EntrezGene: | MMP9 |
HGNC: | 7176 |
UniProt: | F5H3W7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 5.68e-99 | 2 |
immature CD1a-positive Langerhans cell | 5.68e-99 | 2 |
Langerhans cell | 1.81e-40 | 5 |
immature conventional dendritic cell | 5.98e-34 | 5 |
common dendritic progenitor | 5.98e-34 | 5 |
conventional dendritic cell | 4.59e-23 | 8 |
dendritic cell | 4.28e-19 | 10 |
transitional epithelial cell | 1.13e-13 | 4 |
urothelial cell | 1.13e-13 | 4 |
macrophage | 1.57e-09 | 6 |
macrophage dendritic cell progenitor | 4.39e-08 | 61 |
granulocyte monocyte progenitor cell | 1.92e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
urothelium | 3.26e-11 | 5 |
transitional epithelium | 1.44e-09 | 6 |