FFCP PHASE1:Hg19::chr20:50140219..50140238,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr20:50140219..50140238,- | |||
|description=CAGE_peak_at_chr20:50140219..50140238,- | |||
|id=chr20:50140219..50140238,- | |||
|ontology_enrichment_celltype=CL:0000838!1.19e-09!52;CL:0000542!2.52e-09!53;CL:0000051!2.52e-09!53;CL:0002274!1.54e-08!5;CL:0000457!1.54e-08!5;CL:0002191!1.54e-08!5;CL:0000097!1.54e-08!5;CL:0000831!1.54e-08!5;CL:0002028!1.54e-08!5;CL:0000080!5.79e-08!6;CL:0000084!3.20e-07!25;CL:0000827!3.20e-07!25;CL:0000791!6.40e-07!18;CL:0000789!6.40e-07!18;CL:0002420!6.40e-07!18;CL:0002419!6.40e-07!18;CL:0000790!6.40e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.72e-59;5!CL:0000163;4.00e-33;9!CL:0000625;4.03e-10;11!CL:0000084;1.08e-07;25!CL:0000151;1.08e-07;36!CL:0002545;3.92e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.37e-59,5;CL:0002028,1.37e-59,5;CL:0000163,3.52e-33,9;CL:0000625,3.91e-10,11;CL:0002031,1.89e-08,120;CL:0000151,2.91e-08,36;CL:0000084,1.10e-07,25;CL:0000827,1.10e-07,25;CL:0000738,2.62e-07,136;CL:0002545,4.17e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0001045;5.37e-13;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;3.92e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.09e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.40e-11!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;5.37e-13;1!UBERON:0001154;5.37e-13;1!UBERON:0001153;5.37e-13;1!UBERON:0009854;5.37e-13;1!UBERON:0005800;3.92e-07;2!UBERON:0001515;3.92e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,3.76e-13,1;UBERON:0001154,5.38e-13,1;UBERON:0001153,5.38e-13,1;UBERON:0001045,5.38e-13,1;UBERON:0005800,4.17e-07,2;UBERON:0001515,4.17e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.410502947249729,0.0787107813136792,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0.223915474239924,0.647787332037959,0.257575567634187,0.290796477559129,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.764546456250458,0,0,0,0.196709770113833,0,0.205601498999509,0.167186495390678,0,0,0,0.668462741311041,0,0.221533894583621,0,0.128091319725675,0.260118695119756,0.822189523018381,0,0,0.14828656316206,0.267540828089713,1.04535523804977,0.339928028092699,0.766440987203842,0.34362744548263,0.506039384039006,0.318565414324097,0,0,0.752875595388864,1.02389288923535,1.24930726552346,0,0,0.403213486449465,1.60464117470104,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0.732186172644509,1.10298924103761,0,0,0.22452937262617,0.225222960966644,1.53316637465883,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.368965315629341,0.171567810298526,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,2.55340458638356,4.56121854189699,2.30591925467138,3.66103056936502,0,0.763976851116555,0,0,0,0,0.857479297891735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.985153801009636,0.862510299438069,1.02674429023799,0.254094624222463,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.647142602455851,0.213455115606889,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0.0711418433484141,0,0.199579371432817,0,0,0,0.561594356226918,0,0.156679895773023,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0.19538809540204,0,0,0.270455678475983,0.33307196799782,0,0,0.879049075631364,0,0,0,0,0.296964680832639,0,0.994147647766298,0,0,0,0,0,1.10513566212459,0.251932747854276,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0.23056390438806,0.269272933229316,0.325942115766024,0.638002319463839,0,0,0,0,0.166211681900156,0,0.19606253431774,0,0,0,0,0,0.141353071433941,0,0,0.353830258013357,0.611030144933625,0.889563386041866,0.741383633679017,0.208843899010911,0.067401132980677,0.802577647298789,0,0.729819156862664,0,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0,0,0,0,0.195551382734803,0,0.640358984218058,0.19980960958213,0,0,1.02956998717179,0,0.248505071130865,0,0,0,0,0,0,0,0,0,1.05154941711726,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0,0.211200673038813,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0.320362237703084,0.471612915298998,0.414239055347196,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0,0,0,1.51649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0.211312123358627,0.59996218756479,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0.397832444232549,0.300841313397029,0,0,0,0,0,0.0675375846183947,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0.455324382702595,0.0887023701626388,0.115233987555779,0,0.0679697329768317,0,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0.615976841137482,0,0.485710993059139,0,0,0,0,0,0,0.771741581079447,0,0,0,0,0,0.297046400327086,0.4226557275834,0,0.469919589899268,0.193373663920732,0,0,0,0,0,0.458729283404541,0.286679166302903,0,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0.606229585745915,0,0,0.103432995861895,0,0,0.581300188524055,0.31037357147929,0.112131862580613,0.12729431655633,0.202117188958219,0,0.342233301085281,0.336760265072938,0.143444410785353,0.332660356546013,0,0,0,0.0898252021065869,0,0,0,0,0.805095174364105,0 | |||
|short_description=p@chr20:50140219..50140238,- | |||
}} |
Latest revision as of 15:19, 28 July 2015
Short description: | p@chr20:50140219..50140238, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:50140219..50140238, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.37e-59 | 5 |
basophil mast progenitor cell | 1.37e-59 | 5 |
endocrine cell | 3.52e-33 | 9 |
CD8-positive, alpha-beta T cell | 3.91e-10 | 11 |
hematopoietic lineage restricted progenitor cell | 1.89e-08 | 120 |
secretory cell | 2.91e-08 | 36 |
T cell | 1.10e-07 | 25 |
pro-T cell | 1.10e-07 | 25 |
leukocyte | 2.62e-07 | 136 |
thoracic aorta endothelial cell | 4.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lymph node | 3.76e-13 | 1 |
vermiform appendix | 5.38e-13 | 1 |
caecum | 5.38e-13 | 1 |
midgut | 5.38e-13 | 1 |
segment of aorta | 4.17e-07 | 2 |
thoracic aorta | 4.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.09e-07 | 2 |