FFCP PHASE1:Hg19::chr20:57430286..57430298,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2778 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4392 | |||
|TSSclassifier=strong | |||
|UniProt=Q5JWF2 | |||
|association_with_transcript=273bp_to_AJ224867_5end | |||
|cluster_id=chr20:57430286..57430298,+ | |||
|description=CAGE_peak_53_at_GNAS_5end | |||
|id=chr20:57430286..57430298,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002327;6.50e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,6.50e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.07e-23;1!UBERON:0006298;1.34e-23;1!UBERON:0003124;4.59e-23;1 | |||
|ontology_enrichment_disease=DOID:5093!4.56e-16!4;DOID:1612!4.56e-16!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;4.01e-50;4!DOID:1612;4.01e-50;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,3.12e-50,4;DOID:1612,3.12e-50,4 | |||
|ontology_enrichment_uberon=UBERON:0002148!9.17e-14!2;UBERON:0009662!9.17e-14!2;UBERON:0003127!1.04e-13!2;UBERON:0001443!3.90e-10!11;UBERON:0001723!5.99e-10!3;UBERON:0001033!5.99e-10!3;UBERON:0010056!5.99e-10!3;UBERON:0000988!1.78e-09!3;UBERON:0006331!1.78e-09!3;UBERON:0001736!2.89e-08!1;UBERON:0006298!2.89e-08!1;UBERON:0007023!3.73e-08!115;UBERON:0002426!4.07e-08!1;UBERON:0003831!4.07e-08!1;UBERON:0003898!4.07e-08!1;UBERON:0004830!4.07e-08!1;UBERON:0001774!4.07e-08!1;UBERON:0003830!4.07e-08!1;UBERON:0005175!4.07e-08!1;UBERON:0003897!4.07e-08!1;UBERON:0001103!4.07e-08!1;UBERON:0010084!4.07e-08!1;UBERON:0002298!1.25e-07!8;UBERON:0002581!1.75e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001443;2.42e-32;11!UBERON:0001736;1.34e-23;1!UBERON:0002426;4.59e-23;1!UBERON:0003831;4.59e-23;1!UBERON:0003898;4.59e-23;1!UBERON:0004830;4.59e-23;1!UBERON:0003830;4.59e-23;1!UBERON:0005175;4.59e-23;1!UBERON:0001774;4.59e-23;1!UBERON:0001103;4.59e-23;1!UBERON:0000310;1.42e-20;10!UBERON:0001044;8.71e-16;6!UBERON:0003293;8.71e-16;6!UBERON:0003294;8.71e-16;6!UBERON:0010047;8.71e-16;6!UBERON:0003408;8.71e-16;6!UBERON:0000167;8.71e-16;6!UBERON:0001829;1.65e-12;2!UBERON:0005090;3.06e-12;2!UBERON:0001630;3.06e-12;2!UBERON:0001723;1.08e-08;3!UBERON:0001033;1.08e-08;3!UBERON:0000165;8.80e-08;28!UBERON:0001041;2.64e-07;14!UBERON:0002365;5.50e-07;31!UBERON:0002330;5.50e-07;31!UBERON:0001911;6.50e-07;4!UBERON:0001987;9.36e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001443,2.06e-32,11;UBERON:0001736,1.34e-23,1;UBERON:0006298,1.34e-23,1;UBERON:0002426,4.10e-23,1;UBERON:0003831,4.10e-23,1;UBERON:0003898,4.10e-23,1;UBERON:0004830,4.10e-23,1;UBERON:0003830,4.10e-23,1;UBERON:0005175,4.10e-23,1;UBERON:0001774,4.10e-23,1;UBERON:0001103,4.10e-23,1;UBERON:0010084,4.10e-23,1;UBERON:0000310,1.28e-20,10;UBERON:0001044,8.39e-16,6;UBERON:0003293,8.39e-16,6;UBERON:0003294,8.39e-16,6;UBERON:0010047,8.39e-16,6;UBERON:0000167,8.39e-16,6;UBERON:0001829,1.65e-12,2;UBERON:0005090,2.90e-12,2;UBERON:0001630,2.90e-12,2;UBERON:0003408,7.08e-10,10;UBERON:0000166,9.69e-10,22;UBERON:0001723,1.12e-08,3;UBERON:0001033,1.12e-08,3;UBERON:0010056,1.12e-08,3;UBERON:0000165,1.56e-07,29;UBERON:0000930,1.56e-07,29;UBERON:0000915,3.45e-07,52;UBERON:0002365,4.04e-07,31;UBERON:0002330,4.04e-07,31;UBERON:0001911,6.50e-07,4;UBERON:0005333,6.50e-07,4;UBERON:0008425,6.50e-07,4;UBERON:0005311,6.50e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63337622438398,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.16684417736373,8.1337799996462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869178975376065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19349733269765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1531308121143,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44181887056222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.33966853447265,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0,0,0,0,0.0636471582781649,0,0.653150243690884,3.08009970976753,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p53@GNAS | |||
}} |
Latest revision as of 06:09, 17 September 2015
Short description: | p53@GNAS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_53_at_GNAS_5end |
Coexpression cluster: | NA |
Association with transcript: | 273bp_to_AJ224867_5end |
EntrezGene: | GNAS |
HGNC: | 4392 |
UniProt: | Q5JWF2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 6.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
chest | 2.06e-32 | 11 |
submandibular gland | 1.34e-23 | 1 |
submandibular gland primordium | 1.34e-23 | 1 |
chest muscle | 4.10e-23 | 1 |
respiratory system muscle | 4.10e-23 | 1 |
skeletal muscle of trunk | 4.10e-23 | 1 |
respiratory system skeletal muscle | 4.10e-23 | 1 |
thoracic segment muscle | 4.10e-23 | 1 |
chest organ | 4.10e-23 | 1 |
muscle of trunk | 4.10e-23 | 1 |
diaphragm | 4.10e-23 | 1 |
future diaphragm | 4.10e-23 | 1 |
breast | 1.28e-20 | 10 |
saliva-secreting gland | 8.39e-16 | 6 |
gland of oral region | 8.39e-16 | 6 |
gland of foregut | 8.39e-16 | 6 |
oral gland | 8.39e-16 | 6 |
oral cavity | 8.39e-16 | 6 |
major salivary gland | 1.65e-12 | 2 |
muscle structure | 2.90e-12 | 2 |
muscle organ | 2.90e-12 | 2 |
gland of gut | 7.08e-10 | 10 |
oral opening | 9.69e-10 | 22 |
tongue | 1.12e-08 | 3 |
gustatory system | 1.12e-08 | 3 |
future tongue | 1.12e-08 | 3 |
mouth | 1.56e-07 | 29 |
stomodeum | 1.56e-07 | 29 |
thoracic segment of trunk | 3.45e-07 | 52 |
exocrine gland | 4.04e-07 | 31 |
exocrine system | 4.04e-07 | 31 |
mammary gland | 6.50e-07 | 4 |
mammary bud | 6.50e-07 | 4 |
mammary ridge | 6.50e-07 | 4 |
mammary placode | 6.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.12e-50 | 4 |
breast cancer | 3.12e-50 | 4 |