FFCP PHASE1:Hg19::chr20:57875457..57875496,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1908 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3178 | |||
|TSSclassifier=strong | |||
|UniProt=P14138 | |||
|association_with_transcript=0bp_to_ENST00000337938_5end | |||
|cluster_id=chr20:57875457..57875496,+ | |||
|description=CAGE_peak_2_at_EDN3_5end | |||
|id=chr20:57875457..57875496,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002577;1.51e-12;3!CL:0002536;3.20e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.24e-12,3;CL:0002536,2.17e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.87e-55!115;UBERON:0001049!2.24e-32!57;UBERON:0005068!2.24e-32!57;UBERON:0006241!2.24e-32!57;UBERON:0007135!2.24e-32!57;UBERON:0002616!2.23e-27!59;UBERON:0002780!2.89e-26!41;UBERON:0001890!2.89e-26!41;UBERON:0006240!2.89e-26!41;UBERON:0003080!2.00e-25!42;UBERON:0003075!1.46e-23!86;UBERON:0007284!1.46e-23!86;UBERON:0000955!1.32e-22!69;UBERON:0006238!1.32e-22!69;UBERON:0001017!5.44e-22!82;UBERON:0002346!6.42e-22!90;UBERON:0005743!7.66e-22!86;UBERON:0001893!2.47e-20!34;UBERON:0002020!5.04e-20!34;UBERON:0003528!5.04e-20!34;UBERON:0000073!1.40e-19!94;UBERON:0001016!1.40e-19!94;UBERON:0000153!2.15e-19!129;UBERON:0007811!2.15e-19!129;UBERON:0002791!4.08e-19!33;UBERON:0003056!9.09e-19!61;UBERON:0001869!2.45e-18!32;UBERON:0002619!2.48e-17!22;UBERON:0001950!3.27e-17!20;UBERON:0000033!3.37e-17!123;UBERON:0000956!1.01e-14!25;UBERON:0000203!1.01e-14!25;UBERON:0004121!1.76e-13!169;UBERON:0000064!3.82e-13!219;UBERON:0000924!7.94e-13!173;UBERON:0006601!7.94e-13!173;UBERON:0001871!1.25e-11!7;UBERON:0000481!3.20e-11!347;UBERON:0000062!1.30e-10!511;UBERON:0003124!2.17e-10!7;UBERON:0005631!1.31e-09!14;UBERON:0000158!1.31e-09!14;UBERON:0002298!2.24e-08!8;UBERON:0003076!4.30e-08!15;UBERON:0003057!4.30e-08!15;UBERON:0001894!1.47e-07!7;UBERON:0006222!1.47e-07!7;UBERON:0001987!1.79e-07!4;UBERON:0004340!1.79e-07!4;UBERON:0005409!2.05e-07!35;UBERON:0000478!4.81e-07!24;UBERON:0002420!5.61e-07!9;UBERON:0007245!5.61e-07!9;UBERON:0010009!5.61e-07!9;UBERON:0010011!5.61e-07!9;UBERON:0000454!5.61e-07!9;UBERON:0000922!5.69e-07!612;UBERON:0004733!8.21e-07!12;UBERON:0002028!8.21e-07!12;UBERON:0007277!8.21e-07!12;UBERON:0002308!8.78e-07!9;UBERON:0000125!8.78e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;4.86e-18;33!UBERON:0000160;3.68e-16;17!UBERON:0005409;4.03e-15;22!UBERON:0000922;5.79e-12;49!UBERON:0001987;1.64e-09;4!UBERON:0000059;7.65e-09;11!UBERON:0001829;9.99e-09;2!UBERON:0004089;2.71e-08;2!UBERON:0003127;3.20e-08;2!UBERON:0000007;6.99e-08;2!UBERON:0001555;8.93e-08;54!UBERON:0002108;9.24e-08;4!UBERON:0001155;3.21e-07;9!UBERON:0001041;9.79e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,9.95e-19,25;UBERON:0000160,4.04e-16,17;UBERON:0004119,1.31e-12,160;UBERON:0000925,1.31e-12,160;UBERON:0006595,1.31e-12,160;UBERON:0007023,1.43e-12,114;UBERON:0001007,5.40e-11,145;UBERON:0001555,5.40e-11,145;UBERON:0007026,5.40e-11,145;UBERON:0011216,1.48e-10,223;UBERON:0004921,6.37e-10,118;UBERON:0001987,1.42e-09,4;UBERON:0004340,1.42e-09,4;UBERON:0000059,8.32e-09,11;UBERON:0001829,1.02e-08,2;UBERON:0003127,2.81e-08,2;UBERON:0004089,2.92e-08,2;UBERON:0000007,8.67e-08,2;UBERON:0002108,9.46e-08,4;UBERON:0001155,3.49e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,3.71350332621293,1.84636884759917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0.906474741580529,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21379189377604,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94065842880137,9.98612637062982,14.5147340798247,0,0,0,0,0,0,0,0,0,0,0,0,1.69203229428271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0.994147647766298,0.562677665642051,0,0,33.357814484223,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.221158519862449,0.591095237907095,0.87754158861589,0,0,3.61666214967846,0,0,0,0.108647371922008,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,3.25112064298064,0,12.9384051040206,25.4757785769617,6.11030144933625,0,0,0,0.876214728748802,0,1.63985112007737,0,0,0,0,3.62972148145992,0.91821828489147,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,5.62536295632833,0,3.61569185248852,0,0,0.886351143382302,0,0,1.70762395791482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,0.728994679896296,0,0.157611414598396,0.996637174564964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.52893040697076,0.855434189421647,0,0.213574825135389,4.55892484789031,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.3755727921195,0.573409195690071,0.554645257684261,0.931446044120752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,2.1160556621441,0,0.449604575675217,0,0.478901577171454,0.82046545696302,0.252071696221718,1.38314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0.0752103283492573,0,3.90757005616546,0,0,0,1.55336444622308,0,0.206686796501184,1.07806877329642,0,2.19303106742873,0.992422356778588,0,0,0,0.336283722218824,1.21393120847326,1.36597314810779,0.266107110487916,0,0,1.90315252335129,1.38122824481983,0,0,0.863424021355654,0.471346769748006,0,7.30526976407596,0,0,13.3661137610347,0,0,1.39086617842064,0,0,0,0,15.48818491753,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0.102662806856247,4.6392577253528,6.79995390282795,0,0,0,2.03302947670128,0,0,42.1370903269378,4.37119121007915,0,0,0,0.196308467114945,0,1.2679671827502,0,1.03382309777839,3.54518383854674,0,0,0,0,3.65168194123259,14.2206077855408,0.143339583151451,0,1.08786384305464,0.436350690340377,5.81929524566941,0,0,0,0,0.109265571963696,0,0,0,0,0.250707539292375,0.454672189309436,0.267964130156178,0.829169439458779,0.20686599172379,0.213233981900981,2.14257988317366,0.0645889098360061,0.31037357147929,0,16.3573196774884,2.42540626749863,0.217716747896961,1.02669990325584,0.134704106029175,1.43444410785353,3.65926392200615,0,0,0,0,4.69281884806909,0.977931553462932,2.84827324821017,0,0.402547587182052,0 | |||
|short_description=p2@EDN3 | |||
}} |
Latest revision as of 07:35, 17 September 2015
Short description: | p2@EDN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EDN3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000337938_5end |
EntrezGene: | EDN3 |
HGNC: | 3178 |
UniProt: | P14138 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.24e-12 | 3 |
amniotic epithelial cell | 2.17e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 9.95e-19 | 25 |
intestine | 4.04e-16 | 17 |
endoderm-derived structure | 1.31e-12 | 160 |
endoderm | 1.31e-12 | 160 |
presumptive endoderm | 1.31e-12 | 160 |
adult organism | 1.43e-12 | 114 |
digestive system | 5.40e-11 | 145 |
digestive tract | 5.40e-11 | 145 |
primitive gut | 5.40e-11 | 145 |
organ system subdivision | 1.48e-10 | 223 |
subdivision of digestive tract | 6.37e-10 | 118 |
placenta | 1.42e-09 | 4 |
allantois | 1.42e-09 | 4 |
large intestine | 8.32e-09 | 11 |
major salivary gland | 1.02e-08 | 2 |
open tracheal system trachea | 2.81e-08 | 2 |
midface | 2.92e-08 | 2 |
pituitary gland | 8.67e-08 | 2 |
small intestine | 9.46e-08 | 4 |
colon | 3.49e-07 | 9 |