FFCP PHASE1:Hg19::chr22:21128379..21128390,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3053 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4838 | |||
|TSSclassifier=strong | |||
|UniProt=P05546,Q8IVC0 | |||
|association_with_transcript=0bp_to_NM_000185,uc002ztb.1_5end | |||
|cluster_id=chr22:21128379..21128390,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_SERPIND1_5end | |||
|id=chr22:21128379..21128390,+ | |||
|ontology_enrichment_celltype=CL:0000181!5.68e-14!12;CL:0000417!5.68e-14!12;CL:0000668!5.68e-14!12;CL:0000414!5.68e-14!12;CL:0000412!5.68e-14!12;CL:0000182!5.68e-14!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.11e-37;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.11e-37,12;CL:0000223,6.31e-13,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.95e-28;11!UBERON:0009497;4.46e-24;13!UBERON:0001041;1.98e-10;30!UBERON:0003104;4.42e-10;31!CL:0000223;4.50e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.52e-21!86;UBERON:0001049!1.74e-20!57;UBERON:0005068!1.74e-20!57;UBERON:0006241!1.74e-20!57;UBERON:0007135!1.74e-20!57;UBERON:0001017!2.22e-20!82;UBERON:0000073!1.02e-18!94;UBERON:0001016!1.02e-18!94;UBERON:0003075!1.89e-17!86;UBERON:0007284!1.89e-17!86;UBERON:0002346!1.81e-16!90;UBERON:0000955!5.28e-16!69;UBERON:0006238!5.28e-16!69;UBERON:0002616!3.39e-15!59;UBERON:0002107!4.57e-15!19;UBERON:0006925!4.57e-15!19;UBERON:0008836!4.57e-15!19;UBERON:0007023!6.27e-15!115;UBERON:0001896!1.72e-14!3;UBERON:0005290!1.72e-14!3;UBERON:0010096!1.72e-14!3;UBERON:0002368!4.20e-14!35;UBERON:0003076!8.90e-14!15;UBERON:0003057!8.90e-14!15;UBERON:0005057!2.64e-13!26;UBERON:0008835!7.97e-13!22;UBERON:0003894!7.97e-13!22;UBERON:0009854!3.30e-12!23;UBERON:0007499!4.03e-11!25;UBERON:0009497!4.03e-11!25;UBERON:0000015!4.03e-11!25;UBERON:0002423!4.03e-11!25;UBERON:0006235!4.03e-11!25;UBERON:0004161!4.03e-11!25;UBERON:0000025!9.90e-11!194;UBERON:0009856!1.22e-10!26;UBERON:0002780!1.73e-10!41;UBERON:0001890!1.73e-10!41;UBERON:0006240!1.73e-10!41;UBERON:0000949!1.82e-10!45;UBERON:0003080!3.39e-10!42;UBERON:0002360!3.68e-10!2;UBERON:0000094!3.68e-10!2;UBERON:0007645!3.68e-10!2;UBERON:0003929!4.76e-10!54;UBERON:0000033!1.87e-09!123;UBERON:0000483!1.91e-09!309;UBERON:0002298!2.69e-09!8;UBERON:0000119!2.77e-09!312;UBERON:0001950!2.87e-09!20;UBERON:0004733!3.47e-09!12;UBERON:0002028!3.47e-09!12;UBERON:0007277!3.47e-09!12;UBERON:0002530!5.63e-09!59;UBERON:0000153!8.00e-09!129;UBERON:0007811!8.00e-09!129;UBERON:0002365!1.05e-08!31;UBERON:0002330!1.05e-08!31;UBERON:0001893!1.44e-08!34;UBERON:0004732!1.86e-08!13;UBERON:0002619!2.20e-08!22;UBERON:0002021!2.38e-08!5;UBERON:0004111!2.55e-08!241;UBERON:0004121!2.65e-08!169;UBERON:0000477!3.49e-08!286;UBERON:0000924!5.29e-08!173;UBERON:0006601!5.29e-08!173;UBERON:0003056!1.03e-07!61;UBERON:0000956!2.58e-07!25;UBERON:0000203!2.58e-07!25;UBERON:0001869!3.18e-07!32;UBERON:0002791!5.14e-07!33;UBERON:0005911!6.94e-07!82;UBERON:0002240!6.96e-07!3;UBERON:0000481!8.55e-07!347;UBERON:0000475!8.99e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.59e-41;19!UBERON:0006925;2.59e-41;19!UBERON:0002423;3.01e-31;25!UBERON:0002365;3.94e-24;31!UBERON:0002330;3.94e-24;31!UBERON:0002368;2.75e-21;33!UBERON:0000949;1.36e-15;43!UBERON:0002530;1.50e-10;57!UBERON:0005172;2.24e-09;52!UBERON:0005173;2.24e-09;52!UBERON:0002417;2.93e-08;58!UBERON:0000916;2.93e-08;58!UBERON:0001007;1.52e-07;81!UBERON:0002360;2.12e-07;2!UBERON:0000094;2.12e-07;2!UBERON:0010743;2.12e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.60e-41,19;UBERON:0006925,2.60e-41,19;UBERON:0008836,2.60e-41,19;UBERON:0008835,1.35e-35,22;UBERON:0003894,1.35e-35,22;UBERON:0009854,5.08e-34,23;UBERON:0007499,3.01e-31,25;UBERON:0009497,3.01e-31,25;UBERON:0000015,3.01e-31,25;UBERON:0002423,3.01e-31,25;UBERON:0006235,3.01e-31,25;UBERON:0004161,3.01e-31,25;UBERON:0009856,5.07e-30,26;UBERON:0002365,4.53e-25,31;UBERON:0002330,4.53e-25,31;UBERON:0002368,3.99e-22,35;UBERON:0003929,6.80e-22,54;UBERON:0000949,4.80e-17,45;UBERON:0002530,3.79e-16,59;UBERON:0005172,4.48e-14,54;UBERON:0005173,4.48e-14,54;UBERON:0005911,5.04e-14,82;UBERON:0002417,1.38e-12,60;UBERON:0000916,1.38e-12,60;UBERON:0004921,2.78e-09,118;UBERON:0011216,5.53e-09,223;UBERON:0001041,2.02e-08,87;UBERON:0002360,1.99e-07,2;UBERON:0000094,1.99e-07,2;UBERON:0010743,1.99e-07,2;UBERON:0001007,2.49e-07,145;UBERON:0001555,2.49e-07,145;UBERON:0007026,2.49e-07,145;UBERON:0005256,2.86e-07,122;UBERON:0000490,3.26e-07,148;UBERON:0005177,3.92e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,59.5748663662605,24.5706804169407,14.7697476670351,0,4.18160691046586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,74.3956104096555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,72.020007594236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,1.75508317723178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0.539209063845416,0,0,0,0,0,0,0,1.83643656978294,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.1989151129687,17.1424985432826,21.1647127702141,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,40.4484164951508,39.7520666736664,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0.665574309221114,0.558867626472451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41023272848151,0.252071696221718,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0,0,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0,0,0,0,0.271878931907327,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0,1.6906229103336,0,0,0.257831551894309,0,0,0,0,0,0,0,0,0.135982980381829,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@SERPIND1 | |||
}} |
Latest revision as of 05:17, 19 September 2015
Short description: | p2@SERPIND1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SERPIND1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_NM_000185, uc002ztb.1_5end |
EntrezGene: | SERPIND1 |
HGNC: | 4838 |
UniProt: | P05546Q8IVC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.11e-37 | 12 |
endodermal cell | 6.31e-13 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 2.60e-41 | 19 |
digestive gland | 2.60e-41 | 19 |
liver bud | 2.60e-41 | 19 |
hepatic diverticulum | 1.35e-35 | 22 |
liver primordium | 1.35e-35 | 22 |
digestive tract diverticulum | 5.08e-34 | 23 |
epithelial sac | 3.01e-31 | 25 |
epithelium of foregut-midgut junction | 3.01e-31 | 25 |
anatomical boundary | 3.01e-31 | 25 |
hepatobiliary system | 3.01e-31 | 25 |
foregut-midgut junction | 3.01e-31 | 25 |
septum transversum | 3.01e-31 | 25 |
sac | 5.07e-30 | 26 |
exocrine gland | 4.53e-25 | 31 |
exocrine system | 4.53e-25 | 31 |
endocrine gland | 3.99e-22 | 35 |
gut epithelium | 6.80e-22 | 54 |
endocrine system | 4.80e-17 | 45 |
gland | 3.79e-16 | 59 |
abdomen element | 4.48e-14 | 54 |
abdominal segment element | 4.48e-14 | 54 |
endo-epithelium | 5.04e-14 | 82 |
abdominal segment of trunk | 1.38e-12 | 60 |
abdomen | 1.38e-12 | 60 |
subdivision of digestive tract | 2.78e-09 | 118 |
organ system subdivision | 5.53e-09 | 223 |
foregut | 2.02e-08 | 87 |
meninx | 1.99e-07 | 2 |
membrane organ | 1.99e-07 | 2 |
meningeal cluster | 1.99e-07 | 2 |
digestive system | 2.49e-07 | 145 |
digestive tract | 2.49e-07 | 145 |
primitive gut | 2.49e-07 | 145 |
trunk mesenchyme | 2.86e-07 | 122 |
unilaminar epithelium | 3.26e-07 | 148 |
trunk region element | 3.92e-07 | 101 |