FFCP PHASE1:Hg19::chr2:127890050..127890052,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:127890050..127890052,+ | |||
|description=CAGE_peak_at_chr2:127890050..127890052,+ | |||
|id=chr2:127890050..127890052,+ | |||
|ontology_enrichment_celltype=CL:0000039!7.39e-08!7;CL:0000586!7.39e-08!7;CL:0002563!6.58e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002563;3.66e-40;4!CL:0002253;4.66e-21;2!CL:0002231;1.96e-14;3!CL:0002076;1.04e-09;42!CL:0002251;6.30e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.31e-40,4;CL:0002253,4.66e-21,2;CL:0002231,2.09e-14,3;CL:0002076,2.90e-09,42;CL:0002251,6.17e-09,20;CL:0000223,6.54e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001871!1.01e-11!7;UBERON:0000200!8.48e-09!6;UBERON:0002771!1.93e-08!3;UBERON:0000060!5.54e-08!12;UBERON:0002079!2.82e-07!1;UBERON:0000473!6.30e-07!8;UBERON:0001242!6.58e-07!4;UBERON:0001262!6.58e-07!4;UBERON:0004786!6.58e-07!4;UBERON:0004808!6.58e-07!4;UBERON:0001277!6.58e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;3.66e-40;4!UBERON:0001262;3.66e-40;4!UBERON:0004786;3.66e-40;4!UBERON:0004808;3.66e-40;4!UBERON:0001277;3.66e-40;4!UBERON:0000485;1.70e-23;7!UBERON:0003929;1.70e-23;7!UBERON:0003350;1.04e-20;8!UBERON:0001052;3.10e-11;4!UBERON:0000160;8.29e-10;17!UBERON:0004907;2.97e-09;5!UBERON:0000344;6.30e-09;20!UBERON:0005409;6.86e-08;22!UBERON:0001871;5.23e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,3.31e-40,4;UBERON:0001262,3.31e-40,4;UBERON:0004786,3.31e-40,4;UBERON:0004808,3.31e-40,4;UBERON:0001277,3.31e-40,4;UBERON:0003350,9.92e-21,8;UBERON:0000485,1.48e-18,9;UBERON:0003929,2.11e-12,54;UBERON:0001052,3.10e-11,4;UBERON:0000160,8.11e-10,17;UBERON:0001046,2.46e-09,19;UBERON:0004907,2.97e-09,5;UBERON:0000344,6.17e-09,20;UBERON:0005911,2.17e-08,82;UBERON:0005409,4.28e-07,25;UBERON:0001871,5.38e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35287282397425,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0877350463246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12029607150911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.62972148145992,0.30607276163049,0,0,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,3.97520666736664,0.129282956361551,0,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0.534434810531121,0.18378979906969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:127890050..127890052,+ | |||
}} |
Latest revision as of 00:06, 29 July 2015
Short description: | p@chr2:127890050..127890052, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:127890050..127890052, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.31e-40 | 4 |
epithelial cell of large intestine | 4.66e-21 | 2 |
epithelial cell of prostate | 2.09e-14 | 3 |
endo-epithelial cell | 2.90e-09 | 42 |
epithelial cell of alimentary canal | 6.17e-09 | 20 |
endodermal cell | 6.54e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 3.31e-40 | 4 |
wall of intestine | 3.31e-40 | 4 |
gastrointestinal system mucosa | 3.31e-40 | 4 |
gastrointestinal system epithelium | 3.31e-40 | 4 |
intestinal epithelium | 3.31e-40 | 4 |
epithelium of mucosa | 9.92e-21 | 8 |
simple columnar epithelium | 1.48e-18 | 9 |
gut epithelium | 2.11e-12 | 54 |
rectum | 3.10e-11 | 4 |
intestine | 8.11e-10 | 17 |
hindgut | 2.46e-09 | 19 |
lower digestive tract | 2.97e-09 | 5 |
mucosa | 6.17e-09 | 20 |
endo-epithelium | 2.17e-08 | 82 |
gastrointestinal system | 4.28e-07 | 25 |
temporal lobe | 5.38e-07 | 6 |