FFCP PHASE1:Hg19::chr2:201560555..201560568,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000484406_5end | |||
|cluster_id=chr2:201560555..201560568,+ | |||
|coexpression_cluster_id=C1076 | |||
|description=CAGE_peak_1_at_ENST00000484406_5end | |||
|id=chr2:201560555..201560568,+ | |||
|ontology_enrichment_celltype=CL:0000817!1.19e-12!3;CL:0000819!3.10e-10!1;CL:0001024!5.79e-10!1;CL:0000037!1.04e-08!172;CL:0000566!1.04e-08!172;CL:0000988!4.31e-08!182 | |||
|ontology_enrichment_celltype_v019=CL:0002032;8.34e-34;1!CL:0000557;8.34e-34;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;8.34e-18;2 | |||
|ontology_enrichment_disease=DOID:2531!1.88e-22!51;DOID:0060083!1.88e-22!51;DOID:1240!9.41e-17!39;DOID:8692!5.56e-13!31;DOID:0060073!3.10e-10!1;DOID:8675!3.10e-10!1;DOID:225!6.33e-10!1;DOID:0060058!2.40e-08!10;DOID:0050686!4.74e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!4.65e-10!4;UBERON:0005058!4.65e-10!4;UBERON:0009113!4.65e-10!4;UBERON:0003295!4.65e-10!4;UBERON:0005562!4.65e-10!4;UBERON:0003351!5.58e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.23e-66;2!UBERON:0005058;1.23e-66;2!UBERON:0009113;1.23e-66;2!UBERON:0004177;1.95e-27;5!UBERON:0005057;1.95e-27;5!UBERON:0002405;8.94e-12;27!UBERON:0002390;1.51e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.06e-34,4;UBERON:0005058,5.06e-34,4;UBERON:0009113,5.06e-34,4;UBERON:0003295,5.06e-34,4;UBERON:0005562,5.06e-34,4;UBERON:0003351,4.34e-23,6;UBERON:0004177,5.89e-20,7;UBERON:0005057,5.89e-20,7;UBERON:0000974,2.66e-14,10;UBERON:0003408,2.66e-14,10;UBERON:0001042,2.66e-14,10;UBERON:0009145,2.66e-14,10;UBERON:0006562,4.25e-13,11;UBERON:0009722,4.25e-13,11;UBERON:0007690,4.25e-13,11;UBERON:0008814,2.17e-08,18;UBERON:0001557,5.35e-08,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432807638929335,0.782560276832555,0,0.199579371432817,0,0,0,1.40398589056729,5.47763229679661,0.156679895773023,0,0,0.1605880751037,0.605399121573143,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729819156862664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47317047000752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77732312294826,8.44216114423667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01273793591026,0 | |||
|short_description=p1@ENST00000484406 | |||
}} |
Latest revision as of 04:53, 29 July 2015
Short description: | p1@ENST00000484406 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000484406_5end |
Coexpression cluster: | C1076_thymus_acute_granulocyte_vein_CD34_Dendritic_Hodgkin |
Association with transcript: | 0bp_to_ENST00000484406_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 5.06e-34 | 4 |
hemolymphoid system gland | 5.06e-34 | 4 |
thymic region | 5.06e-34 | 4 |
pharyngeal gland | 5.06e-34 | 4 |
thymus primordium | 5.06e-34 | 4 |
pharyngeal epithelium | 4.34e-23 | 6 |
hemopoietic organ | 5.89e-20 | 7 |
immune organ | 5.89e-20 | 7 |
neck | 2.66e-14 | 10 |
gland of gut | 2.66e-14 | 10 |
chordate pharynx | 2.66e-14 | 10 |
pharyngeal region of foregut | 2.66e-14 | 10 |
pharynx | 4.25e-13 | 11 |
entire pharyngeal arch endoderm | 4.25e-13 | 11 |
early pharyngeal endoderm | 4.25e-13 | 11 |
pharyngeal arch system | 2.17e-08 | 18 |
upper respiratory tract | 5.35e-08 | 19 |