FFCP PHASE1:Hg19::chr9:136739554..136739562,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:136739554..136739562,+
|short_description=p@chr9:136739554..136739562,+
|description=CAGE_peak_at_chr9:136739554..136739562,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:136739554..136739562,+ | |||
|description=CAGE_peak_at_chr9:136739554..136739562,+ | |||
|id=chr9:136739554..136739562,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.96e-41!254;CL:0002076!6.22e-16!43;CL:0000076!1.26e-13!62;CL:0000223!5.91e-11!59;CL:0002368!3.80e-10!13;CL:0000063!3.19e-09!578;CL:0000077!1.25e-07!19;CL:0000548!5.32e-07!679;CL:0000004!5.32e-07!679;CL:0000255!5.32e-07!679;CL:0000349!5.49e-07!3;CL:0002577!5.49e-07!3;CL:0000012!7.52e-07!682;CL:0002328!8.51e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002577;9.76e-12;3!CL:0002328;2.57e-11;3!CL:0002368;8.58e-10;13!CL:1001319;6.21e-09;1!CL:1000600;6.21e-09;1!CL:0002252;6.21e-09;1!CL:0002076;9.09e-09;42!CL:0000244;1.57e-08;4!CL:0000731;1.57e-08;4!CL:0002202;2.94e-08;9!CL:0002632;2.94e-08;9!CL:0000312;3.97e-07;5!CL:0000349;7.09e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.31e-13,253;CL:0002577,9.78e-12,3;CL:0002328,3.09e-11,3;CL:0002076,1.56e-10,42;CL:0002368,1.03e-09,13;CL:0002252,5.75e-09,1;CL:1001319,6.22e-09,1;CL:1000600,6.22e-09,1;CL:0000244,1.52e-08,4;CL:0000731,1.52e-08,4;CL:0002202,3.64e-08,9;CL:0002632,3.64e-08,9;CL:0000223,2.46e-07,58;CL:0000312,4.43e-07,5;CL:0000349,7.79e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.77e-24!106;DOID:0050687!2.66e-16!143;DOID:1749!4.81e-16!14;DOID:162!8.44e-16!235;DOID:14566!4.18e-15!239;DOID:120!4.82e-07!27 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000365;3.03e-14;5!UBERON:0005910;5.78e-12;6!UBERON:0004815;2.57e-11;3!UBERON:0002031;2.57e-11;3!UBERON:0001987;5.11e-09;4!UBERON:0004645;6.21e-09;1!UBERON:0004913;6.21e-09;1!UBERON:0003703;6.21e-09;1!UBERON:0001256;6.21e-09;1!UBERON:0001259;6.21e-09;1!UBERON:0001174;6.21e-09;1!UBERON:0004914;6.21e-09;1!UBERON:0002185;3.97e-07;5!UBERON:0005911;7.36e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,2.90e-14,5;UBERON:0005910,5.58e-12,6;UBERON:0004815,3.09e-11,3;UBERON:0002031,3.09e-11,3;UBERON:0003124,5.50e-11,7;UBERON:0005631,3.05e-09,14;UBERON:0000158,3.05e-09,14;UBERON:0004913,4.19e-09,1;UBERON:0003703,4.19e-09,1;UBERON:0001174,4.19e-09,1;UBERON:0004914,4.19e-09,1;UBERON:0001987,5.12e-09,4;UBERON:0004340,5.12e-09,4;UBERON:0004645,6.22e-09,1;UBERON:0001256,6.22e-09,1;UBERON:0001259,6.22e-09,1;UBERON:0004119,5.70e-08,160;UBERON:0000925,5.70e-08,160;UBERON:0006595,5.70e-08,160;UBERON:0002185,4.43e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75826367343678,0.6024118375565,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.674338760312407,0.723033089650446,0.661763836394364,0.435758888184812,0.71181185733329,0.404493924480493,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0,0,0,0,1.20725313949488,2.24803506515239,0,0.0925884451585296,0,0,0,0,0,0,0,0,3.1608175918371,0,0,0,0,0.93733833986777,1.34385702559088,0.567100388969546,0.179117045405697,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,1.74306691720059,0.699810938274399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,3.32870879020994,3.0239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0.328014645699706,0.976135183992909,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0.534192213880424,0.165284915360978,0.384380134730212,3.1903178123646,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.384888450902048,0,1.08890984861323,0,1.29151611801369,0,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,0,0,0,0.111308705022906,0,0,0,0,0,0.818149460017238,0,0,0.269605053441981,0.179021174675609,0,0,0,0,0,0,0,0.7812832832557,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0,0,0,0.179515288819544,0,0.31900115973192,0.274792780205587,5.33034776018635,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881931576729399,0.435296032902013,0,0,0.0967563312890851,0.292357268344742,0.0821154570532092,0,0,0,0,0,0,0.195551382734803,0.240476460754601,0,0.19980960958213,0,0,0,0,0,1.41416420770077,0.135904206073614,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0,0,2.87872795979168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,2.55336503108073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,1.20206087197775,0.380805212168795,0.406870733204662,0,0.429642228169954,0,0.796191777397232,0,0,0,0,0,0.428883182749851,0.260994291965212,0,0,0.734210113519403,0.179088841081487,1.85280868296583,0.219284049578707,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76665893301846,0.353909170043221,0.366857197043358,0.924205329202706,0,0,0,0,0,0,0,0.655087670040387,1.6264169483875,0,0,0,0,0,0,0,0,1.02209942111676,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.156986185701028,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0.955538938977433,0.447421727191169,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0.352894871715692,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,1.30245229777559,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75826367343678,0.6024118375565,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.674338760312407,0.723033089650446,0.661763836394364,0.435758888184812,0.71181185733329,0.404493924480493,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0,0,0,0,1.20725313949488,2.24803506515239,0,0.0925884451585296,0,0,0,0,0,0,0,0,3.1608175918371,0,0,0,0,0.93733833986777,1.34385702559088,0.567100388969546,0.179117045405697,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,1.74306691720059,0.699810938274399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,3.32870879020994,3.0239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0.328014645699706,0.976135183992909,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0.534192213880424,0.165284915360978,0.384380134730212,3.1903178123646,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.384888450902048,0,1.08890984861323,0,1.29151611801369,0,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,0,0,0,0.111308705022906,0,0,0,0,0,0.818149460017238,0,0,0.269605053441981,0.179021174675609,0,0,0,0,0,0,0,0.7812832832557,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0,0,0,0.179515288819544,0,0.31900115973192,0.274792780205587,5.33034776018635,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881931576729399,0.435296032902013,0,0,0.0967563312890851,0.292357268344742,0.0821154570532092,0,0,0,0,0,0,0.195551382734803,0.240476460754601,0,0.19980960958213,0,0,0,0,0,1.41416420770077,0.135904206073614,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0,0,2.87872795979168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,2.55336503108073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,1.20206087197775,0.380805212168795,0.406870733204662,0,0.429642228169954,0,0.796191777397232,0,0,0,0,0,0.428883182749851,0.260994291965212,0,0,0.734210113519403,0.179088841081487,1.85280868296583,0.219284049578707,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76665893301846,0.353909170043221,0.366857197043358,0.924205329202706,0,0,0,0,0,0,0,0.655087670040387,1.6264169483875,0,0,0,0,0,0,0,0,1.02209942111676,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.156986185701028,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0.955538938977433,0.447421727191169,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0.352894871715692,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,1.30245229777559,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr9:136739554..136739562,+ | |||
}} | }} |
Latest revision as of 00:00, 1 August 2015
Short description: | p@chr9:136739554..136739562, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:136739554..136739562, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.31e-13 | 253 |
placental epithelial cell | 9.78e-12 | 3 |
bronchial epithelial cell | 3.09e-11 | 3 |
endo-epithelial cell | 1.56e-10 | 42 |
respiratory epithelial cell | 1.03e-09 | 13 |
epithelial cell of esophagus | 5.75e-09 | 1 |
bladder cell | 6.22e-09 | 1 |
lower urinary tract cell | 6.22e-09 | 1 |
transitional epithelial cell | 1.52e-08 | 4 |
urothelial cell | 1.52e-08 | 4 |
epithelial cell of tracheobronchial tree | 3.64e-08 | 9 |
epithelial cell of lower respiratory tract | 3.64e-08 | 9 |
endodermal cell | 2.46e-07 | 58 |
keratinocyte | 4.43e-07 | 5 |
extraembryonic cell | 7.79e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
urothelium | 2.90e-14 | 5 |
transitional epithelium | 5.58e-12 | 6 |
lower respiratory tract epithelium | 3.09e-11 | 3 |
epithelium of bronchus | 3.09e-11 | 3 |
chorion | 5.50e-11 | 7 |
extraembryonic membrane | 3.05e-09 | 14 |
membranous layer | 3.05e-09 | 14 |
hepatopancreatic ampulla | 4.19e-09 | 1 |
extrahepatic bile duct | 4.19e-09 | 1 |
common bile duct | 4.19e-09 | 1 |
duodenal papilla | 4.19e-09 | 1 |
placenta | 5.12e-09 | 4 |
allantois | 5.12e-09 | 4 |
urinary bladder urothelium | 6.22e-09 | 1 |
wall of urinary bladder | 6.22e-09 | 1 |
mucosa of urinary bladder | 6.22e-09 | 1 |
endoderm-derived structure | 5.70e-08 | 160 |
endoderm | 5.70e-08 | 160 |
presumptive endoderm | 5.70e-08 | 160 |
bronchus | 4.43e-07 | 5 |