FFCP PHASE1:Hg19::chr9:140064150..140064165,-: Difference between revisions
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|id=chr9:140064150..140064165,-
|short_description=p4@MIR3621
|description=CAGE_peak_4_at_MIR3621_5end
|association_with_transcript=-428bp_to_NR_037416_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100500811 | |EntrezGene=100500811 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=38930 | |HGNC=38930 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-428bp_to_NR_037416_5end | |||
|cluster_id=chr9:140064150..140064165,- | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_4_at_MIR3621_5end | |||
|id=chr9:140064150..140064165,- | |||
|ontology_enrichment_celltype=CL:0000784!2.53e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000784;4.51e-54;3!CL:0000451;2.49e-15;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,6.50e-54,3;CL:0000451,2.74e-15,10 | |||
|ontology_enrichment_development_v019=UBERON:0006298;8.94e-20;1!UBERON:0008801;1.42e-19;1!UBERON:0008425;1.42e-19;1 | |||
|ontology_enrichment_disease=DOID:305!4.42e-14!106;DOID:0050687!2.94e-11!143;DOID:5093!7.61e-09!4;DOID:1612!7.61e-09!4;DOID:299!3.04e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:5093;7.06e-41;4!DOID:1612;7.06e-41;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,5.75e-41,4;DOID:1612,5.75e-41,4 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.28e-11!9;UBERON:0001557!8.26e-11!19;UBERON:0000065!5.02e-09!53;UBERON:0001004!8.07e-09!72;UBERON:0004921!1.20e-08!129;UBERON:0004185!1.20e-08!129;UBERON:0000072!5.82e-08!46;UBERON:0008947!5.88e-08!38;UBERON:0003258!5.88e-08!38;UBERON:0001007!7.23e-07!155;UBERON:0001555!7.23e-07!155;UBERON:0007026!7.23e-07!155;UBERON:0001041!8.98e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.72e-37;2!UBERON:0001044;4.29e-28;6!UBERON:0003293;4.29e-28;6!UBERON:0003294;4.29e-28;6!UBERON:0010047;4.29e-28;6!UBERON:0003408;4.29e-28;6!UBERON:0000167;4.29e-28;6!UBERON:0001736;8.94e-20;1!UBERON:0001831;1.42e-19;1!UBERON:0001567;1.42e-19;1!UBERON:0001000;3.56e-19;1!UBERON:0005352;3.56e-19;1!UBERON:0000310;7.90e-17;10!UBERON:0001443;2.31e-15;11!UBERON:0001041;1.89e-12;14!UBERON:0004089;1.80e-10;2!UBERON:0002365;1.01e-09;31!UBERON:0002330;1.01e-09;31!UBERON:0000161;2.48e-09;19!UBERON:0000166;2.48e-09;19!UBERON:0006947;2.88e-07;3!UBERON:0004054;2.88e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.89e-37,2;UBERON:0001044,4.49e-28,6;UBERON:0003293,4.49e-28,6;UBERON:0003294,4.49e-28,6;UBERON:0010047,4.49e-28,6;UBERON:0000167,4.49e-28,6;UBERON:0001736,8.95e-20,1;UBERON:0006298,8.95e-20,1;UBERON:0001831,1.56e-19,1;UBERON:0001567,1.56e-19,1;UBERON:0008801,1.56e-19,1;UBERON:0001000,4.69e-19,1;UBERON:0005352,4.69e-19,1;UBERON:0003408,3.79e-17,10;UBERON:0000310,7.29e-17,10;UBERON:0001443,2.15e-15,11;UBERON:0004089,1.89e-10,2;UBERON:0002365,8.32e-10,31;UBERON:0002330,8.32e-10,31;UBERON:0000166,3.93e-08,22;UBERON:0006947,3.16e-07,3;UBERON:0004054,3.16e-07,3 | |||
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| ||
|short_description=p4@MIR3621 | |||
}} | }} |
Latest revision as of 16:09, 16 September 2015
Short description: | p4@MIR3621 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MIR3621_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | -428bp_to_NR_037416_5end |
EntrezGene: | MIR3621 |
HGNC: | 38930 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 6.50e-54 | 3 |
dendritic cell | 2.74e-15 | 10 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.89e-37 | 2 |
saliva-secreting gland | 4.49e-28 | 6 |
gland of oral region | 4.49e-28 | 6 |
gland of foregut | 4.49e-28 | 6 |
oral gland | 4.49e-28 | 6 |
oral cavity | 4.49e-28 | 6 |
submandibular gland | 8.95e-20 | 1 |
submandibular gland primordium | 8.95e-20 | 1 |
parotid gland | 1.56e-19 | 1 |
cheek | 1.56e-19 | 1 |
parotid gland primordium | 1.56e-19 | 1 |
vas deferens | 4.69e-19 | 1 |
spermatic cord | 4.69e-19 | 1 |
gland of gut | 3.79e-17 | 10 |
breast | 7.29e-17 | 10 |
chest | 2.15e-15 | 11 |
midface | 1.89e-10 | 2 |
exocrine gland | 8.32e-10 | 31 |
exocrine system | 8.32e-10 | 31 |
oral opening | 3.93e-08 | 22 |
male genital duct | 3.16e-07 | 3 |
internal male genitalia | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 5.75e-41 | 4 |
breast cancer | 5.75e-41 | 4 |