FFCP PHASE1:Hg19::chr9:16702531..16702537,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:16702531..16702537,-
|short_description=p@chr9:16702531..16702537,-
|description=CAGE_peak_at_chr9:16702531..16702537,-
|association_with_transcript=NA
|E...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:16702531..16702537,- | |||
|description=CAGE_peak_at_chr9:16702531..16702537,- | |||
|id=chr9:16702531..16702537,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;2.05e-29;1!CL:0002625;2.05e-29;1!CL:0000216;2.05e-29;1!CL:0002590;9.43e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.33e-29,1;CL:0002625,1.33e-29,1;CL:0000216,1.33e-29,1;CL:0002590,1.09e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.18e-08;4!UBERON:0007284;2.18e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;2.05e-29;1!UBERON:0001136;2.05e-29;1!UBERON:0001343;2.05e-29;1!UBERON:0005208;2.05e-29;1!UBERON:0004910;2.05e-29;1!UBERON:0004145;2.05e-29;1!UBERON:0005946;2.05e-29;1!UBERON:0004813;2.05e-29;1!UBERON:0005965;2.05e-29;1!UBERON:0002078;2.05e-29;1!UBERON:0002081;1.91e-15;2!UBERON:0002133;1.91e-15;2!UBERON:0004909;1.91e-15;2!UBERON:0005409;8.88e-12;22!UBERON:0003978;9.43e-11;3!UBERON:0004151;9.43e-11;3!UBERON:0000946;9.43e-11;3!UBERON:0002114;9.43e-11;2!UBERON:0005904;2.18e-08;4!UBERON:0000160;2.95e-07;17!UBERON:0002108;5.86e-07;4!UBERON:0000945;5.86e-07;5!UBERON:0010039;5.86e-07;5!UBERON:0005284;5.86e-07;5!UBERON:0004921;6.10e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.33e-29,1;UBERON:0001343,1.33e-29,1;UBERON:0004910,1.33e-29,1;UBERON:0005154,1.33e-29,1;UBERON:0005295,1.33e-29,1;UBERON:0004813,1.33e-29,1;UBERON:0005297,1.33e-29,1;UBERON:0005294,1.33e-29,1;UBERON:0010141,1.33e-29,1;UBERON:0005891,1.33e-29,1;UBERON:0002134,2.37e-29,1;UBERON:0005208,2.37e-29,1;UBERON:0005946,2.37e-29,1;UBERON:0005965,2.37e-29,1;UBERON:0002078,2.37e-29,1;UBERON:0004909,1.54e-15,2;UBERON:0002081,2.05e-15,2;UBERON:0002133,2.05e-15,2;UBERON:0010227,2.05e-15,2;UBERON:0003978,9.90e-11,3;UBERON:0009751,9.90e-11,3;UBERON:0004151,9.90e-11,3;UBERON:0000946,9.90e-11,3;UBERON:0002523,9.90e-11,3;UBERON:0005983,9.90e-11,3;UBERON:0004145,9.90e-11,3;UBERON:0002165,9.90e-11,3;UBERON:0002062,9.90e-11,3;UBERON:0007280,9.90e-11,3;UBERON:0002114,1.20e-10,2;UBERON:0005409,1.65e-10,25;UBERON:0005904,1.96e-08,4;UBERON:0000160,2.95e-07,17;UBERON:0005284,6.39e-07,5;UBERON:0002108,6.77e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0.0764134057479513,0.246301768349837,0.157421562627358,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.283604451492204,0.665188192387692,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0.286836620748814,0.354668382198357,0,0,0,0,0,0.326923806226917,0.151357427644931,0,0,0,0,0,0.23486899728753,0,0,0.204154171254893,0.368502951935304,0,0,0,0,0,0,0.250237039743928,0,0,0.30648779579902,0,0.113432183160021,0.179389635688862,0,0.211931901159562,0.300091096084402,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0.063497894292169,0.381988425558278,0,0,0,0.300343057843917,0.285826432630578,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0.114814448164607,0.546273504020151,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0.096670718292122,0.308097234229289,0.921022048356777,0.137836572484531,0.966782203814463,0.290033387828457,0.426133137080504,0,0,0,0,0,0,0,0,0,0,0,0,0,1.116475108079,0.316379424718726,0.190630193923825,0,0,0,0,0.179872457583315,0.54907405947211,0.471249609382746,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0.222617410045812,0,4.85588438694385,0,0.552567831062295,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520874984799877,0,0,0,0.110579259931225,0,0,0.10893846351899,0,0.461701551022782,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,1.99052386215701,0,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0.146178634172371,0,0.290967049465258,0,0.225980740780532,0.137041924646751,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,1.43574604915363,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.136203406111576,0,0.275078873194468,0.83088067605837,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0.597019211547496,0,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0.453692771289717,0.15543720058278,0.147855149989634,0.159296767163702,0.449803112163605,0,0.414706207840855,0.265841714557995,0,0,0.380805212168795,0,0.727394636810238,0,0,0.796191777397232,0.400027764663154,0,0,0,0,0.428883182749851,0,0,0,0,0.179088841081487,0.308801447160972,0.438568099157414,0,0,0.168942440653073,0,0,0.303859956177382,0,0,0,0,0.655219697692825,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637724760305049,0.123935764259002,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0.163771917510097,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0.47775168788705,0,0,0.116241425368125,0,0.801711364730253,0,0,0,0,0.118332000730565,0.170426809518315,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0,0,0.485710993059139,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0.297046400327086,0,0.169927114687817,0,0,0,0,0,0,1.46067277649303,0.458729283404541,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0.665320713092027,0.0814032686109745,0,0,0,0,0.366724332548599,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0.0764134057479513,0.246301768349837,0.157421562627358,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.283604451492204,0.665188192387692,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0.286836620748814,0.354668382198357,0,0,0,0,0,0.326923806226917,0.151357427644931,0,0,0,0,0,0.23486899728753,0,0,0.204154171254893,0.368502951935304,0,0,0,0,0,0,0.250237039743928,0,0,0.30648779579902,0,0.113432183160021,0.179389635688862,0,0.211931901159562,0.300091096084402,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0.063497894292169,0.381988425558278,0,0,0,0.300343057843917,0.285826432630578,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0.114814448164607,0.546273504020151,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0.096670718292122,0.308097234229289,0.921022048356777,0.137836572484531,0.966782203814463,0.290033387828457,0.426133137080504,0,0,0,0,0,0,0,0,0,0,0,0,0,1.116475108079,0.316379424718726,0.190630193923825,0,0,0,0,0.179872457583315,0.54907405947211,0.471249609382746,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0.222617410045812,0,4.85588438694385,0,0.552567831062295,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520874984799877,0,0,0,0.110579259931225,0,0,0.10893846351899,0,0.461701551022782,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,1.99052386215701,0,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0.146178634172371,0,0.290967049465258,0,0.225980740780532,0.137041924646751,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,1.43574604915363,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.136203406111576,0,0.275078873194468,0.83088067605837,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0.597019211547496,0,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0.453692771289717,0.15543720058278,0.147855149989634,0.159296767163702,0.449803112163605,0,0.414706207840855,0.265841714557995,0,0,0.380805212168795,0,0.727394636810238,0,0,0.796191777397232,0.400027764663154,0,0,0,0,0.428883182749851,0,0,0,0,0.179088841081487,0.308801447160972,0.438568099157414,0,0,0.168942440653073,0,0,0.303859956177382,0,0,0,0,0.655219697692825,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637724760305049,0.123935764259002,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0.163771917510097,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0.47775168788705,0,0,0.116241425368125,0,0.801711364730253,0,0,0,0,0.118332000730565,0.170426809518315,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0,0,0.485710993059139,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0.297046400327086,0,0.169927114687817,0,0,0,0,0,0,1.46067277649303,0.458729283404541,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0.665320713092027,0.0814032686109745,0,0,0,0,0.366724332548599,0.406896178315738,0,0,0 | ||
|short_description=p@chr9:16702531..16702537,- | |||
}} | }} |
Latest revision as of 00:55, 1 August 2015
Short description: | p@chr9:16702531..16702537, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:16702531..16702537, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.33e-29 | 1 |
seminiferous tubule epithelial cell | 1.33e-29 | 1 |
Sertoli cell | 1.33e-29 | 1 |
smooth muscle cell of the brain vasculature | 1.09e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.33e-29 | 1 |
seminiferous tubule of testis | 1.33e-29 | 1 |
epithelium of male gonad | 1.33e-29 | 1 |
epithelial cord | 1.33e-29 | 1 |
sex cord | 1.33e-29 | 1 |
seminiferous tubule epithelium | 1.33e-29 | 1 |
testis sex cord | 1.33e-29 | 1 |
genital ridge | 1.33e-29 | 1 |
primitive sex cord of indifferent gonad | 1.33e-29 | 1 |
coelomic epithelium | 1.33e-29 | 1 |
tricuspid valve | 2.37e-29 | 1 |
right atrium valve | 2.37e-29 | 1 |
outflow tract of atrium | 2.37e-29 | 1 |
outflow part of right atrium | 2.37e-29 | 1 |
right cardiac atrium | 2.37e-29 | 1 |
epithelium of gonad | 1.54e-15 | 2 |
cardiac atrium | 2.05e-15 | 2 |
atrioventricular valve | 2.05e-15 | 2 |
future cardiac atrium | 2.05e-15 | 2 |
valve | 9.90e-11 | 3 |
cardiac mesenchyme | 9.90e-11 | 3 |
cardiac chamber | 9.90e-11 | 3 |
cardial valve | 9.90e-11 | 3 |
tunica intima | 9.90e-11 | 3 |
heart layer | 9.90e-11 | 3 |
outflow tract | 9.90e-11 | 3 |
endocardium | 9.90e-11 | 3 |
endocardial cushion | 9.90e-11 | 3 |
presumptive endocardium | 9.90e-11 | 3 |
duodenum | 1.20e-10 | 2 |
gastrointestinal system | 1.65e-10 | 25 |
duct of male reproductive system | 1.96e-08 | 4 |
intestine | 2.95e-07 | 17 |
brain vasculature | 6.39e-07 | 5 |
small intestine | 6.77e-07 | 4 |