FFCP PHASE1:Hg19::chr2:53161742..53161748,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:53161742..53161748,- | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_at_chr2:53161742..53161748,- | |||
|id=chr2:53161742..53161748,- | |||
|ontology_enrichment_celltype=CL:0000066!3.87e-12!254;CL:0000148!1.51e-10!10;CL:0000541!1.51e-10!10;CL:0002150!8.54e-08!3;CL:0000861!8.54e-08!3;CL:0000147!2.82e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.07e-41;10!CL:0000147;7.32e-30;14!CL:0002567;5.15e-23;3!CL:0000710;5.81e-21;20!CL:0002566;3.16e-18;1!CL:0000075;1.46e-15;27!CL:0002077;1.23e-11;34!CL:0002178;7.49e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.21e-41,10;CL:0000541,1.21e-41,10;CL:0000147,8.01e-30,14;CL:0002567,5.76e-23,3;CL:0000710,6.19e-21,20;CL:0002566,3.16e-18,1;CL:0000075,1.53e-15,27;CL:0002077,2.34e-12,34;CL:0000333,8.88e-10,41;CL:0000133,6.92e-07,59;CL:0002178,7.28e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.09e-14!106;DOID:0050687!1.60e-12!143;DOID:1749!2.41e-08!14;DOID:14566!4.27e-08!239;DOID:162!2.79e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:0060060;1.12e-17;1!DOID:3371;1.12e-17;1!DOID:4549;1.12e-17;1!DOID:5861;1.12e-17;1!DOID:0060061;1.12e-17;1!DOID:6496;1.12e-17;1!DOID:8691;1.12e-17;1!DOID:3493;1.17e-09;2!DOID:1909;1.64e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,7.37e-18,1;DOID:4549,7.37e-18,1;DOID:5861,7.37e-18,1;DOID:6496,7.37e-18,1;DOID:0060060,8.72e-18,1;DOID:0060061,8.72e-18,1;DOID:8691,8.72e-18,1;DOID:3493,1.12e-09,2;DOID:1909,1.71e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002294!1.17e-09!7;UBERON:0001173!1.17e-09!7;UBERON:0004912!1.17e-09!7;UBERON:0002394!3.51e-07!4;UBERON:0003928!3.51e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;9.37e-07;3!UBERON:0004755;9.37e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,8.15e-07,3;UBERON:0004755,8.15e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.581267877027924,0,0,0,0,0,0,5.71481048629521,3.81988425558278,1.17217447210047,0,3.08482478109971,13.2150945451324,0.857479297891735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.644566922551274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322260734604821,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0.988551862620595,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370691816839509,0.208843899010911,0,0,0,0,0.19566461893209,0,0,0,0,0,0.751617097072463,0,0,0.330991955875499,0.313932918407225,0,0,0.277349346026277,0,0.195984794828755,0.0870592065804026,0,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0,1.85337866052151,0,0,0,0,0,0.0801588202515337,0.213452994739353,0,0.288180834308212,0,0,1.1524383839052,0,0,0,0,0,0,0,0,0,0,1.57732412567589,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0.584580926518165,0,0,0,0.245772908753719,0.422624246717254,1.79988656269437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0.11796972334774,0,0,0,0,0,0,0,0,0,0.163771917510097,0.591424344868181,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0.115233987555779,0.342976018874837,0,0,0,0,0,0,0,0,0.215927591218621,0,0.142953088353313,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.22910686854405,0,0,0,2.84635677484205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,2.47026410200984,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325613074443898,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr2:53161742..53161748,- | |||
}} |
Latest revision as of 10:45, 29 July 2015
Short description: | p@chr2:53161742..53161748, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:53161742..53161748, - |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.21e-41 | 10 |
melanoblast | 1.21e-41 | 10 |
pigment cell | 8.01e-30 | 14 |
light melanocyte | 5.76e-23 | 3 |
neurecto-epithelial cell | 6.19e-21 | 20 |
dark melanocyte | 3.16e-18 | 1 |
columnar/cuboidal epithelial cell | 1.53e-15 | 27 |
ecto-epithelial cell | 2.34e-12 | 34 |
migratory neural crest cell | 8.88e-10 | 41 |
neurectodermal cell | 6.92e-07 | 59 |
epithelial cell of stomach | 7.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 8.15e-07 | 3 |
skeletal tissue | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 7.37e-18 | 1 |
extraosseous chondrosarcoma | 7.37e-18 | 1 |
myxoid chondrosarcoma | 7.37e-18 | 1 |
extraskeletal myxoid chondrosarcoma | 7.37e-18 | 1 |
non-Hodgkin lymphoma | 8.72e-18 | 1 |
cutaneous T cell lymphoma | 8.72e-18 | 1 |
mycosis fungoides | 8.72e-18 | 1 |
signet ring cell adenocarcinoma | 1.12e-09 | 2 |
melanoma | 1.71e-09 | 2 |