FFCP PHASE1:Hg19::chr3:109035342..109035370,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=151871 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19197 | |||
|TSSclassifier=strong | |||
|UniProt=Q7Z7J5 | |||
|association_with_transcript=0bp_to_ENST00000478945,NM_138815,uc003dxo.2_5end | |||
|cluster_id=chr3:109035342..109035370,- | |||
|description=CAGE_peak_1_at_DPPA2_5end | |||
|id=chr3:109035342..109035370,- | |||
|ontology_enrichment_celltype=CL:0002322!7.44e-37!5;CL:0000039!5.31e-36!7;CL:0000586!5.31e-36!7;CL:0000540!1.30e-11!6;CL:0000031!1.30e-11!6;CL:0000404!1.30e-11!6;CL:0000047!7.91e-09!8;CL:0000148!3.05e-07!10;CL:0000541!3.05e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.49e-50;5!CL:0000039;8.36e-23;7!CL:0000586;8.36e-23;7!CL:0002321;9.55e-17;15!CL:0000540;1.15e-15;6!CL:0000404;1.15e-15;6!CL:0000148;9.70e-10;10!CL:0000147;4.29e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.45e-50,5;CL:0000039,7.47e-23,7;CL:0000586,7.47e-23,7;CL:0000540,1.12e-15,6;CL:0000031,1.12e-15,6;CL:0000404,1.12e-15,6;CL:0000047,6.64e-12,8;CL:0000148,9.28e-10,10;CL:0000541,9.28e-10,10;CL:0000147,4.16e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.68e-16;10!UBERON:0005564;4.68e-16;10!CL:0000031;1.15e-15;6 | |||
|ontology_enrichment_disease=DOID:3095!5.41e-15!22;DOID:2994!5.41e-15!22;DOID:3112!3.53e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.08e-07;22!DOID:2994;2.08e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.01e-07,22;DOID:2994,2.01e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.67e-31!8;UBERON:0003135!8.28e-23!11;UBERON:0000991!9.17e-16!21;UBERON:0009196!9.17e-16!21;UBERON:0009117!9.17e-16!21;UBERON:0005564!9.17e-16!21;UBERON:0004176!5.18e-15!22;UBERON:0003101!3.57e-11!22;UBERON:0000079!3.57e-11!22;UBERON:0003133!1.54e-10!48;UBERON:0002323!8.45e-09!46;UBERON:0005156!2.54e-08!59;UBERON:0000990!2.54e-08!59;UBERON:0004458!3.41e-08!49 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.38e-20;8!UBERON:0003135;1.27e-14;11!UBERON:0000922;7.44e-10;49!UBERON:0000991;9.37e-08;21!UBERON:0003101;2.08e-07;22!UBERON:0000079;2.08e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.88e-20,8;UBERON:0003135,1.19e-14,11;UBERON:0000991,9.04e-08,21;UBERON:0009196,9.04e-08,21;UBERON:0009117,9.04e-08,21;UBERON:0005564,9.04e-08,21;UBERON:0004176,2.01e-07,22;UBERON:0003101,2.01e-07,22;UBERON:0000079,2.01e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9282908984237,1.85541675650079,3.83440011469411,3.42081481550722,3.5324919122588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20536194382929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0146916532018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6002644994473,0,0,0,0,0,0,0,0,0,1.63407695278485,0,0,0,0.23056390438806,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34797542718508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.4491728485195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89355667237035,3.30094647833361,2.49264202817511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23520578864389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54596118010839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504665699340316,0,0,1.42784361638774,1.87052183685892,1.65410819162721,14.2903297396654,0.151557396436479,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@DPPA2 | |||
}} |
Latest revision as of 11:48, 19 September 2015
Short description: | p1@DPPA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DPPA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000478945, NM_138815, uc003dxo.2_5end |
EntrezGene: | DPPA2 |
HGNC: | 19197 |
UniProt: | Q7Z7J5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.45e-50 | 5 |
germ line cell | 7.47e-23 | 7 |
germ cell | 7.47e-23 | 7 |
neuron | 1.12e-15 | 6 |
neuroblast | 1.12e-15 | 6 |
electrically signaling cell | 1.12e-15 | 6 |
neuronal stem cell | 6.64e-12 | 8 |
melanocyte | 9.28e-10 | 10 |
melanoblast | 9.28e-10 | 10 |
pigment cell | 4.16e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
testis | 4.88e-20 | 8 |
male reproductive organ | 1.19e-14 | 11 |
gonad | 9.04e-08 | 21 |
indifferent external genitalia | 9.04e-08 | 21 |
indifferent gonad | 9.04e-08 | 21 |
gonad primordium | 9.04e-08 | 21 |
external genitalia | 2.01e-07 | 22 |
male organism | 2.01e-07 | 22 |
male reproductive system | 2.01e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.01e-07 | 22 |
germ cell cancer | 2.01e-07 | 22 |